DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and hes5.4

DIOPT Version :9

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_002933895.2 Gene:hes5.4 / 100271766 XenbaseID:XB-GENE-5952810 Length:159 Species:Xenopus tropicalis


Alignment Length:169 Identity:40/169 - (23%)
Similarity:76/169 - (44%) Gaps:29/169 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SKTQHYLKVKKPLLERQRRARMNKCLDTLKTLV-AEFQGDDAILRMDKAEMLEAALVFMRKQVVK 76
            |||. ..:::||::|:.||.|:|..:..|:.|: .|||......:::||::||..:.::::..::
 Frog    17 SKTS-LRQIRKPVVEKMRRDRINSSIKQLRMLLEKEFQRHQPNSKLEKADILEMTVNYLKEHQLQ 80

  Fly    77 QQAP--VSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTSV 139
            ..|.  ....|...:..||...:.|..:.::.|     ::.|.....|...|.|.:.||   .::
 Frog    81 MNAVAFARKSPFQDYNQGYSRCLEETLQFLSHT-----EMQKPANLKLVQHFNRTVPAD---NNL 137

  Fly   140 TTSTPRPLSPASSGYHSDNEDSQSAASPKPVEETMWRPW 178
            ....|....|:|:          :||       .:||||
 Frog   138 PQGAPSLKQPSSN----------TAA-------IIWRPW 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 HLH 20..72 CDD:238036 16/52 (31%)
ORANGE 87..131 CDD:128787 8/43 (19%)
hes5.4XP_002933895.2 bHLH-O_HES5 23..81 CDD:381467 16/57 (28%)
Hairy_orange 93..129 CDD:413415 7/40 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I5183
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1378299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.970

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