DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and her4.4

DIOPT Version :9

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001121862.1 Gene:her4.4 / 100149066 ZFINID:ZDB-GENE-081031-104 Length:152 Species:Danio rerio


Alignment Length:181 Identity:52/181 - (28%)
Similarity:80/181 - (44%) Gaps:32/181 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPQSNNSTTFVSKTQHYL--KVKKPLLERQRRARMNKCLDTLKTLVA-EFQGDDAILRMDKAEM 62
            |.|....|   :|..:..|  |::||::|:.||.|:|..::.||||:| ||.......|.:||::
Zfish     1 MTPTITGS---ISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPDSRQEKADI 62

  Fly    63 LEAALVFMRKQVVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQ 127
            ||..|.|:|:......|.      |........|||.:|:....|.:      .|.:..|.:..|
Zfish    63 LEMTLDFLRRSQKSSAAG------DGRSRCVQEAVSFLSQCPVQTQS------HTRLMKLFLHMQ 115

  Fly   128 RMLQADQVQTSVTTSTPRPLSPASSGYHSDNEDSQSAASPKPVEETMWRPW 178
              ..||| .|.|.       :|.::..|:::    ||....|....:||||
Zfish   116 --TPADQ-HTRVD-------NPQTTEKHANS----SAKQHTPARSHIWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 HLH 20..72 CDD:238036 22/52 (42%)
ORANGE 87..131 CDD:128787 9/43 (21%)
her4.4NP_001121862.1 HLH 19..75 CDD:238036 23/55 (42%)
ORANGE 77..123 CDD:128787 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1378299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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