DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and her4.2

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_073794021.1 Gene:her4.2 / 100148329 ZFINID:ZDB-GENE-060815-1 Length:209 Species:Danio rerio


Alignment Length:184 Identity:54/184 - (29%)
Similarity:79/184 - (42%) Gaps:38/184 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPQSNNSTTFVSKTQHYL--KVKKPLLERQRRARMNKCLDTLKTLVA-EFQGDDAILRMDKAEM 62
            |||....|   :|..:..|  |::||::|:.||.|:|..::.||||:| ||.......|.:||::
Zfish    58 MAPTITGS---ISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPDSRQEKADI 119

  Fly    63 LEAALVFMRKQVVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQ 127
            ||..|.|:|:......|.      |........|||.:|:....|.:      .|.:..|.:..|
Zfish   120 LEMTLDFLRRSQKSSAAG------DGRSRCVQEAVSFLSQCPVQTQS------HTRLMKLFLHMQ 172

  Fly   128 RMLQADQ---VQTSVTTSTPRPLSPASSGYHSDNEDSQSAASPKPVEETMWRPW 178
              ..|||   |....||.|           |:::    ||....|....:||||
Zfish   173 --TPADQHTRVDNPQTTET-----------HANS----SAKQHTPARSHIWRPW 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 23/58 (40%)
ORANGE 87..131 CDD:128787 9/43 (21%)
her4.2XP_073794021.1 None

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