DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and BHLHE40

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_003661.1 Gene:BHLHE40 / 8553 HGNCID:1046 Length:412 Species:Homo sapiens


Alignment Length:200 Identity:57/200 - (28%)
Similarity:96/200 - (48%) Gaps:26/200 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EMSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKL 68
            :..:||   |:...|:|:|||.|||:|:..||||:.|.|:.  ..:..||||.:||||:.|::.|
Human    48 DSKETY---KLPHRLIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKAL 107

  Fly    69 ------KQRGGLSLQ-GVVAGVGSPPTSTSTAHVES----FRSGYVHAADQITQVLLQTQQTDEI 122
                  :|:..::|| |:.||      ..|..:||:    |.||:...|.::.|.|.:.:.|.::
Human   108 TNLIDQQQQKIIALQSGLQAG------ELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDL 166

  Fly   123 GRKIMKFLSTRLIELQTQLLQ-QQQQQQQHQQQQIPQSSGRLAFPLLGGYGPAAAAAAISYSSFL 186
            .   ...|.|.|..:.::||| ...::......::.....:.:.|..|..||......:...:|.
Human   167 K---SSQLVTHLHRVVSELLQGGTSRKPSDPAPKVMDFKEKPSSPAKGSEGPGKNCVPVIQRTFA 228

  Fly   187 TSKDE 191
            .|..|
Human   229 HSSGE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 28/71 (39%)
ORANGE 96..136 CDD:128787 11/43 (26%)
BHLHE40NP_003661.1 Essential for interaction with BMAL1, E-box binding and repressor activity against the CLOCK-BMAL1 heterodimer 1..139 37/101 (37%)
bHLH-O_DEC1 40..129 CDD:381592 34/91 (37%)
Necessary for interaction with RXRA and repressor activity against RXRA. /evidence=ECO:0000269|PubMed:19786558 75..79 3/3 (100%)
ORANGE 140..184 CDD:128787 11/46 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..303 9/51 (18%)

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