DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and bhlhe40

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_004914192.2 Gene:bhlhe40 / 779502 XenbaseID:XB-GENE-486416 Length:385 Species:Xenopus tropicalis


Alignment Length:129 Identity:43/129 - (33%)
Similarity:65/129 - (50%) Gaps:27/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MSKTYQYRKVMK--------------PLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKA 55
            |...:::||.:|              .|:|:|||.|||:|:..||||:.|.|:.  ..:..||||
 Frog    54 MYPVFKHRKALKRCEESKQDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKA 116

  Fly    56 DILELTVDHMRKL------KQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVL 113
            .:||||:.|:|.|      :|:..|:||.     |||......:..|.|.||:...|::..:.|
 Frog   117 VVLELTLKHVRSLSSLIEQQQQQILTLQS-----GSPSEENRISAEEMFHSGFQLCAEEALRFL 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 30/85 (35%)
ORANGE 96..136 CDD:128787 6/18 (33%)
bhlhe40XP_004914192.2 bHLH_SF 61..151 CDD:469605 36/96 (38%)
Hairy_orange 159..192 CDD:462193 5/17 (29%)

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