DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and her11

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_073777454.1 Gene:her11 / 445409 ZFINID:ZDB-GENE-040824-4 Length:388 Species:Danio rerio


Alignment Length:192 Identity:50/192 - (26%)
Similarity:82/192 - (42%) Gaps:24/192 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKL- 68
            |:||...::.:||::|:|||.|||..||.|:||:.:..........:||||:||:|.|.:::|. 
Zfish   123 MTKTEGIKRRLKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILDLAVQYIKKTI 187

  Fly    69 ---------KQRGGLSLQG--VVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTDEI 122
                     .|....|.|.  |::..|...||......::.....|.....::|.|..:.:|   
Zfish   188 RKTETARNSNQMDCKSTQNQFVISPAGPLYTSDYCRRFKTSEQNEVLLNLGVSQNLSGSSKT--- 249

  Fly   123 GRKIMKFLSTRLIELQTQLLQQQQQQQQHQQQQIPQSSGRLAFPLLGGYGPAAAAAAISYSS 184
            |.|::.         |...|.....|..||:..:...|......||......:.:::..|||
Zfish   250 GNKLVS---------QKGFLLSPPGQNYHQELLLHPESSLYGSSLLRQSTSPSISSSSQYSS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 26/75 (35%)
ORANGE 96..136 CDD:128787 6/39 (15%)
her11XP_073777454.1 None

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