DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and helt

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_996948.1 Gene:helt / 404275 ZFINID:ZDB-GENE-040824-6 Length:270 Species:Danio rerio


Alignment Length:227 Identity:55/227 - (24%)
Similarity:90/227 - (39%) Gaps:63/227 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MEMSKTYQYRK--VMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHM 65
            |..||....:|  |...::|::||.|||:||::|...:...|.::..  .:||||:|||:||.::
Zfish    49 MMASKMKDRKKTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQNS--GKLEKAEILEMTVQYL 111

  Fly    66 RKL--------KQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVL-----LQTQ 117
            |.|        :::|.|                .|.....|..||......:...|     ::|:
Zfish   112 RALHSADFPRGREKGEL----------------LTEFANYFHYGYHECMKNLVHYLTTVERMETK 160

  Fly   118 QTDEIGRKIMKFLSTRLI----------------ELQTQLLQQQQQQQQHQQQQIP------QSS 160
            .|..  .:|:.||.::::                :|..||..|.....:...||.|      .||
Zfish   161 DTKY--ARILAFLQSKVVTEPVFGSLGTISPDPTDLLCQLEYQSPSPTESVFQQSPPGHFSWHSS 223

  Fly   161 GR---LAFPLL---GGYGPAAAAAAISYSSFL 186
            .|   ||:|.:   .||..........|.:|:
Zfish   224 TRSPTLAYPAMSQHSGYLSPVQGLDHHYMNFI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 25/75 (33%)
ORANGE 96..136 CDD:128787 9/60 (15%)
heltNP_996948.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
bHLH-O_HELT 63..118 CDD:381414 21/56 (38%)
Hairy_orange 135..173 CDD:462193 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.

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