DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and bhlhe40

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_997844.2 Gene:bhlhe40 / 324413 ZFINID:ZDB-GENE-030131-3133 Length:403 Species:Danio rerio


Alignment Length:229 Identity:69/229 - (30%)
Similarity:106/229 - (46%) Gaps:54/229 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EMSK-TYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRK 67
            |.|| ||   |:...|:|:|||.|||:|:..||||:.|.|:.  ..:..||||.:||||:.|::.
Zfish    44 EDSKDTY---KLPHRLIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKA 103

  Fly    68 L------KQRGGLSLQ-GVVAG-VGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTDEIGR 124
            |      :|:..:||| |:..| .|:.|:..|.   |.||||:...|.::.| .|..|:|     
Zfish   104 LNNLLEQQQQKIISLQNGLQIGEQGNGPSENSE---EMFRSGFHLCAKEVLQ-FLANQET----- 159

  Fly   125 KIMKFLST-RLIELQTQLLQQQQQQQQHQQQQIPQSSGRLAFPLLGGYGPAAAAAAISYSSFLTS 188
              |:.|:| .:||...::..:..|.....:...|.|..:.:.....|..|.||            
Zfish   160 --MRDLTTAHIIEHLQKVASELIQSPPSPRLDEPASKAQESREKPSGLQPKAA------------ 210

  Fly   189 KDELIDVTSVDGNA------LSETASVSSQESGA 216
                      :|:|      :..|...||::||:
Zfish   211 ----------EGHAKNCVPVIQRTYPHSSEQSGS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 30/72 (42%)
ORANGE 96..136 CDD:128787 13/40 (33%)
bhlhe40NP_997844.2 bHLH-O_DEC1 37..126 CDD:381592 36/86 (42%)
Hairy_orange 138..177 CDD:462193 14/46 (30%)

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