DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and her2

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_073771585.1 Gene:her2 / 30300 ZFINID:ZDB-GENE-980526-274 Length:133 Species:Danio rerio


Alignment Length:114 Identity:32/114 - (28%)
Similarity:60/114 - (52%) Gaps:15/114 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLKQRGGLSLQ 77
            |:.||::|:.||.|||||::.|| ::::...:..:..::||||||||:.|.:::..         
Zfish    17 KLRKPVVEKMRRDRINKCIEQLK-ILLKTEIKASQPCSKLEKADILEMAVIYLKNT--------- 71

  Fly    78 GVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTDEIGRKI 126
                 ..:...|.|.||.:|:..||....::..:.|...:||.:..:.:
Zfish    72 -----ADAHARSYSEAHAQSYADGYSRCIEETARFLSAHKQTQKHSKPV 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 22/57 (39%)
ORANGE 96..136 CDD:128787 6/31 (19%)
her2XP_073771585.1 None

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