DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and Helt

DIOPT Version :9

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_006509452.1 Gene:Helt / 234219 MGIID:3040955 Length:241 Species:Mus musculus


Alignment Length:209 Identity:50/209 - (23%)
Similarity:82/209 - (39%) Gaps:41/209 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MSKTYQYRK---VMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMR 66
            ||...:.||   |...::|::||.|||:||::|...:...|.::..  .:||||:|||:||.::|
Mouse     1 MSDRLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSS--GKLEKAEILEMTVQYLR 63

  Fly    67 KLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVL-----LQTQQTDEIGRKI 126
                    :|.......|.............|..||......:...|     ::|:.|..  .:|
Mouse    64 --------ALHSADFPRGREKAELLAEFANYFHYGYHECMKNLVHYLTTVERMETKDTKY--ARI 118

  Fly   127 MKFLSTRL---------------IELQTQLLQQQQQQQQH---QQQQIPQSSGRLAFPLLGGYGP 173
            :.||.::.               .:...||.....:...|   :....||.:...:||...|   
Mouse   119 LAFLQSKARLGAEPTFPPLSLPEPDFSYQLHAASPEFPGHSPGEATMFPQGATPGSFPWPPG--- 180

  Fly   174 AAAAAAISYSSFLT 187
            ||.:.|:.|.|..|
Mouse   181 AARSPALPYLSSAT 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 HLH 11..70 CDD:238036 23/61 (38%)
ORANGE 96..136 CDD:128787 9/59 (15%)
HeltXP_006509452.1 bHLH-O_HELT 14..69 CDD:381414 21/64 (33%)
Hairy_orange 87..127 CDD:369405 9/41 (22%)
PLN02983 <147..>213 CDD:215533 14/51 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830832
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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