DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m3-HLH and hry

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_316733.4 Gene:hry / 1277284 VectorBaseID:AGAMI1_005577 Length:374 Species:Anopheles gambiae


Alignment Length:247 Identity:62/247 - (25%)
Similarity:115/247 - (46%) Gaps:56/247 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKL-KQRGGLS 75
            |:..||::|::||||||.||::||.|:::.::::....::||||||||:||.|:..| :|:..:|
Mosquito    34 RRSNKPIMEKRRRARINNCLNELKTLILDAMKKDPARHSKLEKADILEMTVKHLENLQRQQTAMS 98

  Fly    76 LQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTDEIGRKIMKFLSTRLIEL-QT 139
                        .:|..:.:..|::|:...|.::.:.   .:....:.|::::.|:..:..: ::
Mosquito    99 ------------QATDPSVMNKFKAGFNECAQEVGRF---PELEPHVKRRLLQHLNNCINGVNKS 148

  Fly   140 QLLQQQQQQQQHQQQQI----PQSSGRLAFP----LLGGYGPAAAAAAISYSSFLTSKDELIDVT 196
            .|.::...|||||||.|    |.|..:...|    |.|..||.:|..|.:...::...:..:..|
Mosquito   149 DLPKRHHHQQQHQQQHILPSPPSSPEQHGHPHPYGLAGHPGPLSAVQAGNGGVYMAGSNVQLIPT 213

  Fly   197 SVDGNAL-------------------------------SETASVSSQESGAS 217
            .:...::                               |.|||..|..||.|
Mosquito   214 KLPNGSIAFMLPTGAPHQTLTTQVHPSQPPVPMLVPIPSRTASTGSASSGHS 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 27/59 (46%)
ORANGE 96..136 CDD:128787 5/39 (13%)
hryXP_316733.4 None

Return to query results.
Submit another query.