DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m3-HLH and LOC108180270

DIOPT Version :10

Sequence 1:NP_524509.2 Gene:E(spl)m3-HLH / 43156 FlyBaseID:FBgn0002609 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001429569.1 Gene:LOC108180270 / 108180270 -ID:- Length:129 Species:Danio rerio


Alignment Length:143 Identity:43/143 - (30%)
Similarity:64/143 - (44%) Gaps:40/143 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLKQRGGLSLQ 77
            |:.|||:||:||||||.|:.:|:.|:::.........::||||:|||.||.|:|.|         
Zfish    10 KISKPLMERRRRARINACIGELRTLLIQAHATPRIQSSKLEKAEILEFTVRHLRTL--------- 65

  Fly    78 GVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTDEIGRKIMKFLSTRLIELQ---- 138
                   ..||   |.....|.:||.....:||                 :|..|.|.:..    
Zfish    66 -------HCPT---TGEWSQFCAGYTACVQEIT-----------------RFFRTALPQPDPRTC 103

  Fly   139 TQLLQQQQQQQQH 151
            |::.|:|.:..||
Zfish   104 TEMNQEQPEDSQH 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m3-HLHNP_524509.2 bHLH-O_ESMB_like 5..71 CDD:381584 27/57 (47%)
ORANGE 96..136 CDD:128787 8/39 (21%)
LOC108180270NP_001429569.1 None

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