DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mbeta-HLH and AT2G40200

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_181549.1 Gene:AT2G40200 / 818611 AraportID:AT2G40200 Length:254 Species:Arabidopsis thaliana


Alignment Length:140 Identity:29/140 - (20%)
Similarity:61/140 - (43%) Gaps:34/140 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 MLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLR---AQKQLRLSSV 81
            :.|::||.|||..|..|:.::        .:..:|:||.:|...:|.:|:|:   |:..:.....
plant    69 LAEKRRRDRINSHLTALRKLV--------PNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLP 125

  Fly    82 TGGVSPSADPK-LSIAES------FRAGYV-----HAANEVSKTLA-----AVPGVSVDLGTQLM 129
            |.....:..|: :|..||      |:|.:.     .|.:|:.:.|.     .:....:.:|.:: 
plant   126 TEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRM- 189

  Fly   130 SHLGHRLNYL 139
                 |:|::
plant   190 -----RINFI 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 16/57 (28%)
ORANGE 97..141 CDD:128787 10/59 (17%)
AT2G40200NP_181549.1 bHLH_AtAIG1_like 57..136 CDD:381461 17/74 (23%)
ACT_UUR-ACR-like 147..221 CDD:153145 8/54 (15%)

Return to query results.
Submit another query.