DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and her4.3

DIOPT Version :9

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001154880.1 Gene:her4.3 / 792198 ZFINID:ZDB-GENE-081030-7 Length:152 Species:Danio rerio


Alignment Length:188 Identity:50/188 - (26%)
Similarity:76/188 - (40%) Gaps:49/188 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KTYQYRKVMKPMLERKRRARINKCLDELKDIMV-ECLTQEGEHITRLEKADILELTVEHMKKLRA 72
            :|....|:.|||:|:.||.|||..:::||.::. |.:.|:.:  :|.|||||||:|::.::  |:
Zfish    13 ETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPD--SRQEKADILEMTLDFLR--RS 73

  Fly    73 QKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLN 137
            ||    ||..|.                 |......|....|:..| |.....|:||....|   
Zfish    74 QK----SSAAGD-----------------GRSRCVQEAVSFLSQCP-VQTQSHTRLMKLFLH--- 113

  Fly   138 YLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW 195
                          :|.|.:....|..|.:......|.|....|..:.     :||||
Zfish   114 --------------MQTPADQHTRVDNPQTTETHANSSAKQHTPVRSH-----IWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 HLH 13..75 CDD:238036 25/62 (40%)
ORANGE 97..141 CDD:128787 9/43 (21%)
her4.3NP_001154880.1 HLH 19..75 CDD:238036 24/59 (41%)
ORANGE 77..123 CDD:128787 13/80 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573743
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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