DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and hes6.2

DIOPT Version :9

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001072210.1 Gene:hes6.2 / 779656 XenbaseID:XB-GENE-479404 Length:189 Species:Xenopus tropicalis


Alignment Length:214 Identity:58/214 - (27%)
Similarity:101/214 - (47%) Gaps:54/214 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EMEMSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHI--TRLEKADILELTVEH 66
            :::.....:.||:.||::|||||.|||.||::||:.:::..     |:  ::||||||||:||.|
 Frog     8 QLKACSAKEERKLRKPLIERKRRERINTCLEQLKETVIKAF-----HLDQSKLEKADILEMTVRH 67

  Fly    67 MKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSH 131
            ::.::..|.      ||..|..:   :...:.|..||:...:|:...|.....:...||.:|::|
 Frog    68 LQNIQKSKS------TGEPSQGS---VDAQQRFSTGYIQCMHELHSLLLTCDWMDPALGARLLNH 123

  Fly   132 LGHRLNYLQVVVPSLPIGVPLQAP-------VEDQ-----AMVTPPPSECDSLESGACSPAPSEA 184
            |          :.|||      .|       ::|.     ..::|..|:|::.::..  |..|:.
 Frog   124 L----------LKSLP------RPEGRTAFLIQDYEGDTGRTMSPSLSDCEAEQTSV--PLHSDV 170

  Fly   185 SS--------TSGPMWRPW 195
            :.        .|..|||||
 Frog   171 AQGKTQCSLLRSLQMWRPW 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 HLH 13..75 CDD:238036 28/63 (44%)
ORANGE 97..141 CDD:128787 10/43 (23%)
hes6.2NP_001072210.1 bHLH_O_HES 25..75 CDD:381416 24/54 (44%)
Hairy_orange 91..129 CDD:369405 11/47 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I4979
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1483774at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.060

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