DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and her13

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001017901.1 Gene:her13 / 550600 ZFINID:ZDB-GENE-050228-1 Length:224 Species:Danio rerio


Alignment Length:227 Identity:60/227 - (26%)
Similarity:98/227 - (43%) Gaps:72/227 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRAQKQLRL 78
            ||..||::|:|||||||:.|.:|:.::.....|     |::|.|::|||||:.::.:...:    
Zfish    25 RKTRKPIVEKKRRARINESLQDLRTLLTNNDLQ-----TKMENAEVLELTVKRVESILQSR---- 80

  Fly    79 SSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVV 143
            |..||.|:..|      :|.|.|||:...:||...::..||:...:..:|::||          :
Zfish    81 SQETGTVTQEA------SERFAAGYIQCMHEVHTFVSTCPGIEARVAAELLNHL----------L 129

  Fly   144 PSLPIGV-PLQAPVEDQAMVTPPPSECDSLESG----------------------------ACS- 178
            .|:|:.. .|...::|  :::.|.|..||.:||                            .|| 
Zfish   130 ESMPLNENHLHEMIKD--LISEPSSSGDSWQSGEAQNPGRHCVSGMSSELPQFLSNPFCDDLCSD 192

  Fly   179 --PAPSEASSTSGP-------------MWRPW 195
              ...:|..|.|..             |||||
Zfish   193 LDETETEERSASAEDTLDFSMVTHSKFMWRPW 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 23/60 (38%)
ORANGE 97..141 CDD:128787 12/43 (28%)
her13NP_001017901.1 bHLH_SF 23..80 CDD:469605 23/59 (39%)
Hairy_orange 94..133 CDD:462193 12/48 (25%)

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