DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and her12

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_991182.1 Gene:her12 / 402914 ZFINID:ZDB-GENE-040824-5 Length:155 Species:Danio rerio


Alignment Length:182 Identity:52/182 - (28%)
Similarity:78/182 - (42%) Gaps:50/182 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMK-KLRAQKQLRL 78
            |:.||::|:.||.|||.|:|:||.:: |......:..|:||||||||:||..:| :::.|:|:  
Zfish    23 KLRKPIVEKMRRDRINTCIDQLKSLL-EKEFHSHDPSTKLEKADILEMTVSFLKQQIKQQQQI-- 84

  Fly    79 SSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVV 143
                    |..|        |..||.|...|....|:            |.|:.| .|.:|.   
Zfish    85 --------PQRD--------FNEGYSHCWRESVHFLS------------LHSNAG-ELQHLH--- 117

  Fly   144 PSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW 195
                     ..|..:..|.:.|.:.|..|.:.|.....|..:     :||||
Zfish   118 ---------SGPKTNSTMGSTPATACSKLNTAALQHPDSVRA-----VWRPW 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 27/60 (45%)
ORANGE 97..141 CDD:128787 11/43 (26%)
her12NP_991182.1 bHLH-O_HES5 23..74 CDD:381467 25/51 (49%)

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