DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and her6

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_571154.2 Gene:her6 / 30288 ZFINID:ZDB-GENE-980526-144 Length:270 Species:Danio rerio


Alignment Length:254 Identity:69/254 - (27%)
Similarity:115/254 - (45%) Gaps:86/254 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKL-RAQKQ 75
            ::||..||::|::||||||:.|.:||.::::.|.::....::||||||||:||:|::.: |||..
Zfish    33 EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMT 97

  Fly    76 LRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLG------H 134
            ..|::         ||  ::...:|||:....|||::.|:...||:.::.|:|:.||.      :
Zfish    98 AALNT---------DP--TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 151

  Fly   135 RLNYLQVVVPS---LPIGVP--------LQAP-VEDQAMVTP---PPSECDS------------- 171
            .:||     |:   :|.|.|        :|.| ...||.|.|   .|.:..|             
Zfish   152 AMNY-----PTQHQIPAGPPHPSFSQPMVQIPSATQQANVVPLSGVPCKSGSSSNLTSDATKVYG 211

  Fly   172 ---------------LESGACSP--------------------APSEASSTSGPMWRPW 195
                           :.:.|.:|                    :|...|.||..:||||
Zfish   212 GFQLVPATDGQFAFLIPNAAFAPNGPVIPVYANNSNTPVPVAVSPGAPSVTSDSVWRPW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 29/63 (46%)
ORANGE 97..141 CDD:128787 15/49 (31%)
her6NP_571154.2 bHLH-O_HES1_4 33..95 CDD:381465 27/61 (44%)
Hairy_orange 109..148 CDD:462193 13/38 (34%)

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