DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and lin-22

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_500281.1 Gene:lin-22 / 177082 WormBaseID:WBGene00003008 Length:173 Species:Caenorhabditis elegans


Alignment Length:163 Identity:46/163 - (28%)
Similarity:77/163 - (47%) Gaps:29/163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRAQKQLRLSSVT 82
            ||::|:||||||||.|.:||.|:::...:.....::.|||||||:.||::::||:.:...||..|
 Worm    26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVEYLQQLRSAQPCSLSPST 90

  Fly    83 GGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVVPSL- 146
            ..:|....||               .|:......:..::..|...:..::.    |.|:...|: 
 Worm    91 SSISTPPTPK---------------EEIRNIKVPLNPIASFLNPMMQQYVA----YQQLAQLSMY 136

  Fly   147 ------PIGVPLQAPVEDQAMVTPPPSECDSLE 173
                  |.||||:|   |..:....|...:.|:
 Worm   137 TQLFNNPAGVPLRA---DAGVTAQSPELAEKLK 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 26/56 (46%)
ORANGE 97..141 CDD:128787 3/43 (7%)
lin-22NP_500281.1 bHLH_O_HES 29..82 CDD:381416 24/52 (46%)

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