DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and vim.2

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_002941006.1 Gene:vim.2 / 100495820 XenbaseID:XB-GENE-920288 Length:374 Species:Xenopus tropicalis


Alignment Length:222 Identity:47/222 - (21%)
Similarity:77/222 - (34%) Gaps:83/222 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLEMEMSKTY-QYRK------VMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRL---E 55
            ::|:.|..:|. ::|:      :.|..||||                ||.|..|.|.:.:|   |
 Frog   150 LILKAEAEQTLREFRQDVDDATIQKLELERK----------------VEQLIDEIEFLKKLHDEE 198

  Fly    56 KADILELTVEH----------------MKKLRAQ---------------KQLRLSSVTGGVSPSA 89
            .||:|....|.                :|.:|||               .:.:|.|:.|.||.:.
 Frog   199 VADLLRQIEESKVSAELDSSRPDLAAAVKAIRAQIEQEVTKNIQDAEKWYKTKLGSLKGQVSKNE 263

  Fly    90 DPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQL-----------------MSHLGHRL- 136
            |...:|.|.. :.|....:::...:.::...:..|..||                 :|||..:| 
 Frog   264 DKMKTIREDI-SRYSSQVSDLQSEIDSLRSRNEALEKQLEDMEEQHLEQVAALHEIISHLEGQLL 327

  Fly   137 -------NYLQVVVPSLPIGVPLQAPV 156
                   .|||.....|.|.:.|.|.:
 Frog   328 ETKADLARYLQDYQDLLNIKIKLDAEI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 22/108 (20%)
ORANGE 97..141 CDD:128787 11/68 (16%)
vim.2XP_002941006.1 Filament 56..367 CDD:459643 47/222 (21%)

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