DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and her4.2

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_073794021.1 Gene:her4.2 / 100148329 ZFINID:ZDB-GENE-060815-1 Length:209 Species:Danio rerio


Alignment Length:188 Identity:50/188 - (26%)
Similarity:77/188 - (40%) Gaps:49/188 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KTYQYRKVMKPMLERKRRARINKCLDELKDIMV-ECLTQEGEHITRLEKADILELTVEHMKKLRA 72
            :|....|:.|||:|:.||.|||..:::||.::. |.:.|:.:  :|.|||||||:|::.::  |:
Zfish    70 ETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPD--SRQEKADILEMTLDFLR--RS 130

  Fly    73 QKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLN 137
            ||    ||..|.                 |......|....|:..| |.....|:||....|   
Zfish   131 QK----SSAAGD-----------------GRSRCVQEAVSFLSQCP-VQTQSHTRLMKLFLH--- 170

  Fly   138 YLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW 195
                          :|.|.:....|..|.:......|.|....|:.:.     :||||
Zfish   171 --------------MQTPADQHTRVDNPQTTETHANSSAKQHTPARSH-----IWRPW 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 26/66 (39%)
ORANGE 97..141 CDD:128787 9/43 (21%)
her4.2XP_073794021.1 None

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