DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and hes5.3

DIOPT Version :9

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_002933894.1 Gene:hes5.3 / 100101782 XenbaseID:XB-GENE-480450 Length:160 Species:Xenopus tropicalis


Alignment Length:189 Identity:47/189 - (24%)
Similarity:81/189 - (42%) Gaps:52/189 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHI---TRLEKADILELTVEHMKKLR 71
            |.|..|:.|||:|:.||.|||..:::|:::    |.:|.:.:   ::.||||||||.|:.:|   
 Frog    21 TKQKNKIRKPMVEKMRRDRINSSINQLQNL----LEKEFQLLQPDSKPEKADILELAVKFLK--- 78

  Fly    72 AQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRL 136
              :|:        .|.|.:.:... :.|..||.:..:|....| :......::..:||:|.    
 Frog    79 --QQI--------CSQSKNNRKDY-QDFSQGYSNCLHETFAFL-SFHRTEEEMQLKLMNHF---- 127

  Fly   137 NYLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW 195
                ..:.|.|.|:.:                     |.:....|...:||. .:||||
 Frog   128 ----QCLDSQPRGISV---------------------SSSHQKGPGPVASTK-ILWRPW 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 HLH 13..75 CDD:238036 23/64 (36%)
ORANGE 97..141 CDD:128787 8/43 (19%)
hes5.3XP_002933894.1 bHLH-O_HES5 26..84 CDD:381467 24/74 (32%)
Hairy_orange 93..135 CDD:383064 9/50 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1011
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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