DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mgamma-HLH and AT2G40200

DIOPT Version :9

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_181549.1 Gene:AT2G40200 / 818611 AraportID:AT2G40200 Length:254 Species:Arabidopsis thaliana


Alignment Length:201 Identity:39/201 - (19%)
Similarity:80/201 - (39%) Gaps:63/201 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQQR---------- 76
            :.|::||.|||..|..|:.|:        .:..:|:||.:|...:..::::||:.          
plant    69 LAEKRRRDRINSHLTALRKLV--------PNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLP 125

  Fly    77 --------QHKRASGDESLTPAEGFRSGYI-----HAVNEVSRSLSQLPGMNVSLGTQLMTHLGQ 128
                    |.:..|..||.|....|::.:.     .|::|:.|.|::|                 
plant   126 TEADEVTVQPE
TISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKL----------------- 173

  Fly   129 RLNQIQPAEKEVLPVTAPLSVHIANRDAYSVPISPIS--------SYAGSPNSNTSSTSHSLLTT 185
               |::..:.|::.|...:.::...:|:.....:.|:        |...:.|..|||::    ||
plant   174 ---QLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSST----TT 231

  Fly   186 IDVTKM 191
            ..|.::
plant   232 SSVCRI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 15/72 (21%)
ORANGE 91..135 CDD:128787 7/48 (15%)
AT2G40200NP_181549.1 bHLH_AtAIG1_like 57..136 CDD:381461 16/74 (22%)
ACT_UUR-ACR-like 147..221 CDD:153145 12/93 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 45 1.000 Domainoid score I4621
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.