DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mgamma-HLH and helt

DIOPT Version :9

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_996948.1 Gene:helt / 404275 ZFINID:ZDB-GENE-040824-6 Length:270 Species:Danio rerio


Alignment Length:114 Identity:37/114 - (32%)
Similarity:56/114 - (49%) Gaps:14/114 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLQMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELT 65
            |.:.:|.:..||....||    :|::||.|||:||:||...:...|..:..  .:||||:|||:|
Zfish    49 MMASKMKDRKKTPVSHKV----IEKRRRDRINRCLNELGKTVPMALAKQNS--GKLEKAEILEMT 107

  Fly    66 VTHLQKMKQQRQHKRASGDESLTP-AEGFRSGY-------IHAVNEVSR 106
            |.:|:.:......:.....|.||. |..|..||       :|.:..|.|
Zfish   108 VQYLRALHSADFPRGREKGELLTEFANYFHYGYHECMKNLVHYLTTVER 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 23/61 (38%)
ORANGE 91..135 CDD:128787 6/23 (26%)
heltNP_996948.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
HLH 62..115 CDD:278439 23/58 (40%)
Hairy_orange 136..173 CDD:284859 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573622
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.