DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mgamma-HLH and her12

DIOPT Version :10

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_991182.1 Gene:her12 / 402914 ZFINID:ZDB-GENE-040824-5 Length:155 Species:Danio rerio


Alignment Length:203 Identity:58/203 - (28%)
Similarity:81/203 - (39%) Gaps:62/203 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTH 68
            |..|:..|.    |:.||::|:.||.|||.|:|:||.|:.....|. :..|:||||||||:||:.
Zfish    14 LHFSDKEKI----KLRKPIVEKMRRDRINTCIDQLKSLLEKEFHSH-DPSTKLEKADILEMTVSF 73

  Fly    69 L-QKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQ 132
            | |::|||:|          .|...|..||.|...|....||    ::.:.|.....|.|.:.|.
Zfish    74 LKQQIKQQQQ----------IPQRDFNEGYSHCWRESVHFLS----LHSNAGELQHLHSGPKTNS 124

  Fly   133 IQPAEKEVLPVTAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSED 197
            ...:    .|.||                        ....||::..|              .:.
Zfish   125 TMGS----TPATA------------------------CSKLNTAALQH--------------PDS 147

  Fly   198 EENVWRPW 205
            ...|||||
Zfish   148 VRAVWRPW 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 bHLH-O_ESMB_like 9..77 CDD:381584 32/68 (47%)
ORANGE 91..135 CDD:128787 11/43 (26%)
her12NP_991182.1 bHLH-O_HES5 23..74 CDD:381467 26/51 (51%)

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