DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mgamma-HLH and her2

DIOPT Version :10

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_073771585.1 Gene:her2 / 30300 ZFINID:ZDB-GENE-980526-274 Length:133 Species:Danio rerio


Alignment Length:189 Identity:44/189 - (23%)
Similarity:73/189 - (38%) Gaps:72/189 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQQRQHKRA 81
            |:.||::|:.||.|||||:::||.|:...::: .:..::||||||||:.|.:|:....  .|.|:
Zfish    17 KLRKPVVEKMRRDRINKCIEQLKILLKTEIKA-SQPCSKLEKADILEMAVIYLKNTAD--AHARS 78

  Fly    82 SGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAEKEVLPVTAP 146
            ..:   ..|:.:..||...:.|.:|.||                          |.|:.      
Zfish    79 YSE---AHAQSYADGYSRCIEETARFLS--------------------------AHKQT------ 108

  Fly   147 LSVHIANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSEDEENVWRPW 205
                    ..:|.|:.                  |...|.::.|        ..:||||
Zfish   109 --------QKHSKPVD------------------SCQITSEIAK--------HGLWRPW 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 bHLH-O_ESMB_like 9..77 CDD:381584 24/59 (41%)
ORANGE 91..135 CDD:128787 6/43 (14%)
her2XP_073771585.1 None

Return to query results.
Submit another query.