DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mgamma-HLH and her3

DIOPT Version :10

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_571155.1 Gene:her3 / 30289 ZFINID:ZDB-GENE-980526-204 Length:229 Species:Danio rerio


Alignment Length:238 Identity:70/238 - (29%)
Similarity:102/238 - (42%) Gaps:61/238 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQ 74
            :|....:||.||::|:||||||||||::||.|:.:.. |......:|||||||||||.||:.:  
Zfish    11 AKPQNVKKVSKPLMEKKRRARINKCLNQLKSLLESAC-SNNIRKRKLEKADILELTVKHLRHL-- 72

  Fly    75 QRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSL--SQLPGMNVSLGTQLMTHLGQRLN------ 131
              |:.:....::...|| :.:||...:|.||..|  |.....:.|:   ::|:|...||      
Zfish    73 --QNTKRGLSKACDSAE-YHAGYRSCLNTVSHYLRASDTDRDSRSI---MLTNLTSGLNHNRVPD 131

  Fly   132 ----QIQPAEKEVLPVTAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSHSLL--------- 183
                :..||....||.|.        |..:.|||....||  |....|:.....|:         
Zfish   132 FSTVESDPALIFTLPSTL--------RRPHKVPIRTDVSY--SSFQQTAERKVCLMPKRTEIGDS 186

  Fly   184 --TTIDVTKMEDDSEDEE-------------------NVWRPW 205
              .::|......:|:..|                   |.||||
Zfish   187 DRMSLDAALRSQESKKAETTHFRPKDLKVIECCIFKQNYWRPW 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 bHLH-O_ESMB_like 9..77 CDD:381584 33/66 (50%)
ORANGE 91..135 CDD:128787 13/55 (24%)
her3NP_571155.1 bHLH_SF 24..78 CDD:469605 29/58 (50%)
ORANGE 88..129 CDD:128787 12/43 (28%)

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