DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mgamma-HLH and Helt

DIOPT Version :9

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_006509452.1 Gene:Helt / 234219 MGIID:3040955 Length:241 Species:Mus musculus


Alignment Length:111 Identity:36/111 - (32%)
Similarity:54/111 - (48%) Gaps:14/111 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDL--MVATLESEGEHVTRLEKADILELTVTH 68
            ||:..|..:...|...::|::||.|||:||:||...  |....:|.|    :||||:|||:||.:
Mouse     1 MSDRLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG----KLEKAEILEMTVQY 61

  Fly    69 LQKMKQQRQHKRASGDESLTP-AEGFRSGY-------IHAVNEVSR 106
            |:.:......:.....|.|.. |..|..||       :|.:..|.|
Mouse    62 LRALHSADFPRGREKAELLAEFANYFHYGYHECMKNLVHYLTTVER 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 24/63 (38%)
ORANGE 91..135 CDD:128787 6/23 (26%)
HeltXP_006509452.1 bHLH-O_HELT 14..69 CDD:381414 23/58 (40%)
Hairy_orange 87..127 CDD:369405 6/21 (29%)
PLN02983 <147..>213 CDD:215533
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830834
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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