DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mgamma-HLH and Usf2

DIOPT Version :9

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_035810.1 Gene:Usf2 / 22282 MGIID:99961 Length:346 Species:Mus musculus


Alignment Length:122 Identity:28/122 - (22%)
Similarity:51/122 - (41%) Gaps:16/122 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQQRQHKR 80
            |:.....:||:||.:||..:.:|..::........:  |...|..||.....::::::|..|..:
Mouse   236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSK--TGASKGGILSKACDYIRELRQTNQRMQ 298

  Fly    81 ASGDESLTPAEGFRSGYIHAVNEVSR-SLSQLPGMNVSLGTQLMTH----LGQRLNQ 132
                |:...||..:..     ||:.| .:.:|...|..|..||..|    :|:...|
Mouse   299 ----ETFKEAERLQMD-----NELLRQQIEELKNENALLRAQLQQHNLEMVGESTRQ 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 13/60 (22%)
ORANGE 91..135 CDD:128787 12/47 (26%)
Usf2NP_035810.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..244 1/7 (14%)
bHLHzip_USF2 229..308 CDD:381493 17/77 (22%)
ZapB 290..>334 CDD:399182 13/52 (25%)
Leucine-zipper 307..328 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.