DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mgamma-HLH and hes5.3

DIOPT Version :9

Sequence 1:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_002933894.1 Gene:hes5.3 / 100101782 XenbaseID:XB-GENE-480450 Length:160 Species:Xenopus tropicalis


Alignment Length:198 Identity:53/198 - (26%)
Similarity:79/198 - (39%) Gaps:62/198 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHV---TRLEKADILELTVTHL-QKM 72
            |.|..|:.|||:|:.||.|||..:::|::|    ||.|.:.:   ::.||||||||.|..| |::
 Frog    21 TKQKNKIRKPMVEKMRRDRINSSINQLQNL----LEKEFQLLQPDSKPEKADILELAVKFLKQQI 81

  Fly    73 KQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAE 137
            ..|.::.|..       .:.|..||.:.::|....||                       ....|
 Frog    82 CSQSKNNRKD-------YQDFSQGYSNCLHETFAFLS-----------------------FHRTE 116

  Fly   138 KEVLPVTAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSEDEENVW 202
            :|   :...|..|....|:....||..||:...|....|            ||:         :|
 Frog   117 EE---MQLKLMNHFQCLDSQPRGISVSSSHQKGPGPVAS------------TKI---------LW 157

  Fly   203 RPW 205
            |||
 Frog   158 RPW 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mgamma-HLHNP_524504.2 HLH 15..77 CDD:238036 27/65 (42%)
ORANGE 91..135 CDD:128787 6/43 (14%)
hes5.3XP_002933894.1 bHLH-O_HES5 26..84 CDD:381467 26/61 (43%)
Hairy_orange 93..135 CDD:383064 11/67 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1011
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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