DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mdelta-HLH and cwo

DIOPT Version :10

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster


Alignment Length:135 Identity:34/135 - (25%)
Similarity:59/135 - (43%) Gaps:30/135 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYL 69
            |:|  .||.....::..::|::||.|||..|.:|..||......:|.  .::||.:|:|:.:.:|
  Fly    54 GRR--NKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGR--GRIEKTEIIEMAIRHL 114

  Fly    70 KAQQ---QQRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLK 131
            |..|   ||:.::             :|:||.....|.:...         :..| |:...|:|.
  Fly   115 KHLQSECQQKESD-------------YRSGYMDCMKEAAKFL---------YDVH-MQDFCHRLL 156

  Fly   132 DMKQE 136
            ...||
  Fly   157 GRLQE 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 22/70 (31%)
ORANGE 91..135 CDD:128787 8/43 (19%)
cwoNP_524775.1 bHLH-O_Cwo_like 62..121 CDD:381446 18/60 (30%)
ORANGE 126..168 CDD:128787 10/59 (17%)

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