DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mdelta-HLH and her15.2

DIOPT Version :9

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001099062.1 Gene:her15.2 / 359836 ZFINID:ZDB-GENE-070627-1 Length:149 Species:Danio rerio


Alignment Length:171 Identity:49/171 - (28%)
Similarity:79/171 - (46%) Gaps:36/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKA 71
            :...|.:|  |:.||::|:.||.|:|..:::||.::......| :..:|||||||||:||.:|| 
Zfish    11 KLSNKEKH--KLRKPVVEKMRRDRINNCIEQLKSMLEKEFQQQ-DPNAKLEKADILEMTVVFLK- 71

  Fly    72 QQQQRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQE 136
             ||.|   |::|...|:.      ||:|...|.....|.        |:..:.|...|.......
Zfish    72 -QQLR---PKTPQNAQIE------GYSQCWRETISFLSV--------GSEAVAQRLQQEARRSAA 118

  Fly   137 EEIIDMAEEP----VNLADQKRSKSPREEDIHHGEEVWRPW 173
            .|:...:|.|    .::..:.|:.:|          :||||
Zfish   119 PELTHTSEAPHQQHTHIKQEPRAHAP----------LWRPW 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 28/67 (42%)
ORANGE 91..135 CDD:128787 8/43 (19%)
her15.2NP_001099062.1 HLH 19..72 CDD:278439 24/55 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573688
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1378299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.