DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mdelta-HLH and her8a

DIOPT Version :10

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_955918.4 Gene:her8a / 323656 ZFINID:ZDB-GENE-030131-2376 Length:221 Species:Danio rerio


Alignment Length:215 Identity:58/215 - (26%)
Similarity:90/215 - (41%) Gaps:52/215 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLK 70
            :.|..|.:  ||:.|||:|:|||.|:|..|::||.::|   ||.....|||||||:||:||.:::
Zfish    12 KNFNAKEE--RKLRKPLIEKKRRERINSSLEQLKGIMV---DAYNLDQSKLEKADVLEITVQHME 71

  Fly    71 -AQQQQRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFG----THLMKQLGHQL 130
             .|:........||.....:..::.:||.|..:||.::..:.||:|...|    .||:|.|.|..
Zfish    72 NLQRGHGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLSCPGMDKTLGARLLNHLLKSLPHIS 136

  Fly   131 KDMKQEEEI-------IDMAEEPVNLADQKR------SKSPREEDIHH----------------- 165
            .:.......       :...:.|:||....:      |.||.....|.                 
Zfish   137 TEPSGTSSAGTSSPLPLSPTQSPINLPSSLQPHALHLSPSPPSSPTHSLVRPREQSSPPSSPSPQ 201

  Fly   166 ------------GEEVWRPW 173
                        ...:||||
Zfish   202 SPASLPPFFPGVDPSMWRPW 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 30/68 (44%)
ORANGE 91..135 CDD:128787 14/47 (30%)
her8aNP_955918.4 None

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