DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mdelta-HLH and Bhlhe41

DIOPT Version :9

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_038964817.1 Gene:Bhlhe41 / 117095 RGDID:70900 Length:410 Species:Rattus norvegicus


Alignment Length:104 Identity:37/104 - (35%)
Similarity:57/104 - (54%) Gaps:13/104 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKA----- 71
            |:...|:...|:|:|||.|:|..:.:||||:.:.:..  ..:..||||.:||||:.:|||     
  Rat    41 TKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALT 103

  Fly    72 -QQQQRVANPQS-----PPPDQVNLDKFRAGYTQAAYEV 104
             ||.|::...|:     ..|.|.:||.|.:|:...|.||
  Rat   104 EQQHQKIIALQNGERSLKS
PVQADLDAFHSGFQTCAKEV 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 27/70 (39%)
ORANGE 91..135 CDD:128787 6/14 (43%)
Bhlhe41XP_038964817.1 bHLH-O_DEC2 31..122 CDD:381593 28/82 (34%)
ORANGE 129..175 CDD:128787 6/14 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334568
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10985
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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