DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf1 and NEK2

DIOPT Version :9

Sequence 1:NP_733132.2 Gene:Nf1 / 43149 FlyBaseID:FBgn0015269 Length:2802 Species:Drosophila melanogaster
Sequence 2:NP_002488.1 Gene:NEK2 / 4751 HGNCID:7745 Length:445 Species:Homo sapiens


Alignment Length:324 Identity:62/324 - (19%)
Similarity:115/324 - (35%) Gaps:96/324 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GTQARMSQDQL-------------VACLIHISRYRFSLVISGLTKMLQRVNEAALQN---RHEPE 76
            ||...||.:|:             :.||:    |....::...|...|:.....::.   |..|.
Human   178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLL----YELCALMPPFTAFSQKELAGKIREGKFRRIPY 238

  Fly    77 RCYFESLVIILT-----------TLERCLTNQ-TKDTARFEEAMNVKLLLREISQFVDVQSDSNP 129
            | |.:.|..|:|           ::|..|.|. ..|....|:..|::...|::.: .:...||:|
Human   239 R-YSDELNEIITRMLNLKDYHRPSVEEILENPLIADLVADEQRRNLERRGRQLGE-PEKSQDSSP 301

  Fly   130 NAAQLKALASKVLFALSQNHFSAVFNRISARIQELTSCSEENPDYNDIELIQHIDMDMIKLTKLL 194
            ..::||  ..::.....:....|...|:..:.|||  |                          :
Human   302 VLSELK--LKEIQLQERERALKAREERLEQKEQEL--C--------------------------V 336

  Fly   195 QETITKFRSKRAPPLILLYSLEKAIWNWIEYHPQEFQDLQRGTNRDISTCWEPLMDFVEYFKTEN 259
            :|.:.:.:..||..|:..|||.|           |.:.|...:|.::......::....:|..|:
Human   337 RERLAEDKLARAENLLKNYSLLK-----------ERKFLSLASNPELLNLPSSVIKKKVHFSGES 390

  Fly   260 KKSKTLVWPLQMLLLILNPSCLEAVVNELQQSEKEKEKDKEK---VASKSAQSTSR-DKDFSAK 319
            |:                 :.:.:..:|.|.:.|.|.||.:|   .|...||:.|. :|::..|
Human   391 KE-----------------NIMRSENSESQLTSKSKCKDLKKRLHAAQLRAQALSDIEKNYQLK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf1NP_733132.2 RasGAP_Neurofibromin 1242..1575 CDD:213332
CRAL_TRIO_2 1633..1767 CDD:404584
PH_NF1 1759..1868 CDD:270123
MOR2-PAG1_mid <1931..>2109 CDD:372971
NEK2NP_002488.1 STKc_Nek2 7..271 CDD:270857 20/97 (21%)
Interaction with PCNT. /evidence=ECO:0000269|PubMed:20599736 264..445 44/233 (19%)
Interaction with CEP85. /evidence=ECO:0000269|PubMed:26220856 301..445 36/195 (18%)
Leucine-zipper 306..334 5/29 (17%)
Necessary for interaction with MAD1L1. /evidence=ECO:0000269|PubMed:14978040 329..445 31/165 (19%)
Required for microtubule binding and for localization to the centrosomes 333..370 13/75 (17%)
Interaction with SAV1 and STK3/MST2. /evidence=ECO:0000269|PubMed:21076410 403..439 12/35 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1826
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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