DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nf1 and RASA3

DIOPT Version :9

Sequence 1:NP_733132.2 Gene:Nf1 / 43149 FlyBaseID:FBgn0015269 Length:2802 Species:Drosophila melanogaster
Sequence 2:NP_031394.2 Gene:RASA3 / 22821 HGNCID:20331 Length:834 Species:Homo sapiens


Alignment Length:816 Identity:167/816 - (20%)
Similarity:294/816 - (36%) Gaps:216/816 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   926 EKIGLNIQKNVKELVGEEMSTQLYP-----------ILFDQVRA----IVEK----FF--DQQGQ 969
            |..||.:.::||..:||..:...||           :..||...    ||||    |:  |...:
Human     4 EDEGLRVFQSVKIKIGEAKNLPSYPGPSKMRDCYCTVNLDQEEVFRTKIVEKSLCPFYGEDFYCE 68

  Fly   970 VNVNVTDINTQFIEHTIYIMKSILDPKA------NKDPNNDQPSPSEHLGVTS-IEGMMLGIVRY 1027
            :..:...::....:..::...||:...|      .|..|.|.....:|:...| ::|.:      
Human    69 IPRSFRHLSFYIFDRDVFRRDSIIGKVAIQKEDLQKYHNRDTWFQLQHVDADSEVQGKV------ 127

  Fly  1028 VRHLDMTVYAI---------RIKTKL--CQLVEVMMKRRDDLA-------FRQEMKFRNKLVEYL 1074
              ||::.:..:         ::.|::  ||.:.::..:.|..|       ||.|.| :.|:..  
Human   128 --HLELRLSEVITDTGVVCHKLATRIVECQGLPIVNGQCDPYATVTLAGPFRSEAK-KTKVKR-- 187

  Fly  1075 TDWVMGTSHQIAPPSSADAAILTNT----SLIFRDLDQACMEAVAALLRGLPLQPEESDRGDL-M 1134
                                 .||.    .:.:.::.:.|..:..:   ....:.|:.|:.:: :
Human   188 ---------------------KTNNPQFDEVFYFEVTRPCSYSKKS---HFDFEEEDVDKLEIRV 228

  Fly  1135 DAKSALFLKYFTLFMNLLNDCIDSSEAEKEMNNTPLLPPRPR----MAAGKLTALRNATILAMSN 1195
            |..:|..||:...|:..|...:..............|.||..    :....|.:||...:....:
Human   229 DLWNASNLKFGDEFLGELRIPLKVLRQSSSYEAWYFLQPRDNGSKSLKPDDLGSLRLNVVYTEDH 293

  Fly  1196 LLGANIDSGLMHSIDLGYNP--DLQTRAAFMEVLTQILQQGTEFDTLAETVLADRFEQLVQLVTM 1258
            :..::.           |:|  ||..::|.:|                                 
Human   294 VFSSDY-----------YSPLRDLLLKSADVE--------------------------------- 314

  Fly  1259 ISDKGELPIAMALANVV--TTSQMDELARVLVTLFDAKHLLSPLLWNMFYREVEVSDCMQTLFRG 1321
                   |::.:.|:::  ...:..|.|..||.||.....:.|.:..:...||:.:....|:|||
Human   315 -------PVSASAAHILGEVCREKQEAAVPLVRLFLHYGRVVPFISAIASAEVKRTQDPNTIFRG 372

  Fly  1322 NSLGSKIMAFCFKIYGASYLQMLLEPLIRPLLDEEEETC-----FEVDPARLDPTEDIEQHRNNL 1381
            |||.||.:....|:.|..||.:.|:|.|       ||.|     .|:||.:|...|::|.:..||
Human   373 NSLASKCIDETMKLAGMHYLHVTLKPAI-------EEICQSHKPCEIDPVKLKDGENLENNMENL 430

  Fly  1382 IALTQKVFDAIINSSDRFPPQLRSMCHCLYQVLSKRFPNLLQNNIGAVGTVIFLRFINPAIVSPQ 1446
            .....:||.||..|....|..:..:...|.:..:|||.:.......||.:.|||||..|||:||.
Human   431 RQYVDRVFHAITESGVSCPTVMCDIFFSLREAAAKRFQDDPDVRYTAVSSFIFLRFFAPAILSPN 495

  Fly  1447 ELGIVDKQVHSSAKRGLMLMSKILQNI-----ANHVEFSKEQHMLCFNDFLRD--HFEAGRRFFI 1504
            ...:..........|.|.|:||.:|.:     :....| ||.:|..|.:|..:  :.:|.:.|..
Human   496 LFQLTPHHTDPQTSRTLTLISKTVQTLGSLSKSKSASF-KESYMATFYEFFNEQKYADAVKNFLD 559

  Fly  1505 QIAS----DCETVDQTSHSMSFISDANVLALHRLLWTHQEKIGDYLSSSRDHKAVGRRPFDKMAT 1565
            .|:|    |.::|:|.            :.|         |.|..:..::..|..|.:.|.|...
Human   560 LISSSGRRDPKSVEQP------------IVL---------KEGFMIKRAQGRKRFGMKNFKKRWF 603

  Fly  1566 LLAYLGPPEHKPVDSHMMFSSYARWSSIDMSSTNFEEIMVKHQMHEKEEFKTLKSM--------N 1622
            .|.......||......::            |...|.|:...:: |:|.|| :|:|        .
Human   604 RLTNHEFTYHKSKGDQPLY------------SIPIENILAVEKL-EEESFK-MKNMFQVIQPERA 654

  Fly  1623 IFYQAGTSKSGYPVFYYIARRYKIGETNGD-LLIYH 1657
            ::.||........   :|....|:.:.|.. |.:||
Human   655 LYIQANNCVEAKD---WIDILTKVSQCNQKRLTVYH 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf1NP_733132.2 RasGAP_Neurofibromin 1242..1575 CDD:213332 87/350 (25%)
CRAL_TRIO_2 1633..1767 CDD:404584 6/26 (23%)
PH_NF1 1759..1868 CDD:270123
MOR2-PAG1_mid <1931..>2109 CDD:372971
RASA3NP_031394.2 C2A_RasA2_RasA3 13..133 CDD:176046 25/127 (20%)
C2B_RasA3 146..288 CDD:175977 27/168 (16%)
RasGAP_RASA3 297..565 CDD:213336 82/326 (25%)
PH_GAP1_mammal-like 562..686 CDD:241522 29/161 (18%)
BTK 679..714 CDD:128417 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R472
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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