DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fid and Trmt9b

DIOPT Version :10

Sequence 1:NP_651453.3 Gene:fid / 43148 FlyBaseID:FBgn0259146 Length:1391 Species:Drosophila melanogaster
Sequence 2:NP_001100784.1 Gene:Trmt9b / 306504 RGDID:1304810 Length:446 Species:Rattus norvegicus


Alignment Length:433 Identity:116/433 - (26%)
Similarity:192/433 - (44%) Gaps:121/433 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LERAYVHDVYEHCEEPTGP--------VRPRMAHFLSGLDPGSVVCDVGCGSGRYLTQCNPAICT 185
            ||:.:||.||    |.|.|        ..||:..||....|||::.|:|||:|:|| :.|..:.|
  Rat     8 LEKQHVHKVY----ESTAPYFSDLQNKAWPRVRQFLQDQKPGSLIADIGCGTGKYL-KVNSQVHT 67

  Fly   186 IGVERCYRLSKVAHEKGGEVALCDNLELPFRDDSFDAVLSLAVVHHFATTERRVQALRELARILR 250
            :|.:.|..|.::|..:|.||.:||||.|||||..|||::|:.|:|||:|.:||::|::|:||:|.
  Rat    68 LGCDYCGPLVEIARNRGCEVMVCDNLNLPFRDQGFDAIISIGVIHHFSTKQRRIRAIKEMARVLA 132

  Fly   251 IGGRVVITVWALEQRHRRFESQDVLIPWQ--------PPKNRNYSYSDEE-DDDNFQPPYHAYT- 305
            .||:::|.|||:||::|.||.||||:||.        ...::::.:|.|. ....:|.|..|.: 
  Rat   133 PGGQLMIYVWAMEQKNRHFEKQDVLVPWNRALCSRLLSESHQSWGHSCEHPTSQGYQGPGSACSC 197

  Fly   306 ----EDSTNSSRS-----------------AGDGDSSSLSSSSPGESCYSF----------VRRA 339
                :...:|.||                 :.:|...:...|:.|:|..|:          :|:.
  Rat   198 AVCFKGRCDSKRSHSMDYGPAVARTCCEAISKEGQQENGLYSNFGKSFRSWFFSRSLDESTLRKQ 262

  Fly   340 IQKLARGRRHAWFMDSWSSKDTKNDSSLDYEDAKDLPIELRRLEDF--------EDFPDPPLSAG 396
            |:::...:...|           .:|::.::.::...::|...|.|        |.|.|     .
  Rat   263 IERVRPMKIEGW-----------ANSTVSHQPSRYPSVDLHAQEPFSTKRPNLDEVFVD-----A 311

  Fly   397 LKSRSLGSILQPPPRQIVRSRSSVPSLGGPLI---PGESKASAAALLLNNPESQQLQLQLQLNGR 458
            ...|.:|.:             .|||.....|   .|||:.......|:                
  Rat   312 SSQRHVGCL-------------GVPSTSDNFIGHKGGESRRKEGGNFLD---------------- 347

  Fly   459 HSPTTTASAGNTLS------RRPKLIKQKQSLCDDDAATPPAP 495
                 |...||:::      |..:.|.::.|..|...:|...|
  Rat   348 -----TTDTGNSVAARNGGDRSARKILRRVSAFDSTDSTSEDP 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fidNP_651453.3 UbiE 158..261 CDD:441828 48/102 (47%)
Trmt9bNP_001100784.1 UbiE 30..143 CDD:441828 52/113 (46%)

Return to query results.
Submit another query.