DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fid and C35D10.12

DIOPT Version :10

Sequence 1:NP_651453.3 Gene:fid / 43148 FlyBaseID:FBgn0259146 Length:1391 Species:Drosophila melanogaster
Sequence 2:NP_498018.1 Gene:C35D10.12 / 183240 WormBaseID:WBGene00016448 Length:365 Species:Caenorhabditis elegans


Alignment Length:163 Identity:64/163 - (39%)
Similarity:99/163 - (60%) Gaps:15/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 SAALERAYVHDVY---------EHCEEPTGP-VRPRMAHFLSGLDPGSVVCDVGCGSGRYLTQCN 180
            |..:|:.|||.:|         ||  :|:.| :.||:..|:.....||::.|||||..:|.:|.:
 Worm     5 SENVEQEYVHSIYSRLATYQQKEH--KPSSPRIWPRVRQFVDQQSAGSIILDVGCGEAKYTSQKS 67

  Fly   181 PAICTIGVERCYRLSKVAHEKGGEVALCDNLELPFRDDSFDAVLSLAVVHHFATTERRVQALREL 245
            .   .||.:.|..:...:.:...::.|.|.:.:|.||||.||:|:::|:||.|||.||.|.|:|.
 Worm    68 H---VIGFDTCSEVLSSSKKDDIDLCLADAINIPIRDDSVDAILNVSVIHHLATTARRRQVLQEC 129

  Fly   246 ARILRIGGRVVITVWALEQRHRRFESQDVLIPW 278
            :|.|||||:::|..||.||.:.:|.|||:|:||
 Worm   130 SRCLRIGGQMLIYAWAFEQPNGKFASQDILVPW 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fidNP_651453.3 UbiE 158..261 CDD:441828 40/102 (39%)
C35D10.12NP_498018.1 UbiE 34..141 CDD:441828 42/109 (39%)

Return to query results.
Submit another query.