DRSC/TRiP Functional Genomics Resources

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Protein Alignment boss and Gprc5c

DIOPT Version :9

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:XP_030102156.2 Gene:Gprc5c / 70355 MGIID:1917605 Length:474 Species:Mus musculus


Alignment Length:392 Identity:79/392 - (20%)
Similarity:150/392 - (38%) Gaps:95/392 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 WRIKMDTWVATGLTAAILGLIATLAILVFI---VVRISLGDVFEGNPTTSILLLLSLILVFCSFV 584
            |.|.::.....|:....:..|..:|.|.|:   ..|..||        |.:..||..:.:||...
Mouse    81 WGIVLEAVAGAGIITTFVLTIILVASLPFVQDTKKRSLLG--------TQVFFLLGTLGLFCLVF 137

  Fly   585 PYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEGGFLSHV 649
                        :.|...|..|    ||.|.|:..:::...||.|:...:.|       .||:..
Mouse   138 ------------ACVVKPDFST----CASRRFLFGVLFAICFSCLVAHVLSL-------NFLTRK 179

  Fly   650 N----GYIQAVICAFSVVAQVGMSVQLLVVMHV---------------ASETVSC--ENIYYGRW 693
            |    |::...:.....:.:|.::.:.|::..|               ::.|..|  .|:.:   
Mouse   180 NHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGGGQVSPLGNVSADSTMTSPCAIANMDF--- 241

  Fly   694 LWGLLAYDFALLCCVGALI---PSIY-RSQRNYREGILIVIGSVLIMVIWVAWIALSLFGDE--- 751
               ::|..:.:|..:.|.:   |::. |.:|..:.|:.:::.:|:.:.|||.||.:..:|:|   
Mouse   242 ---VMALIYVMLLLLTAFLGAWPTLCGRFKRWRKHGVFVLLTTVISIAIWVVWIVMYTYGNEQHH 303

  Fly   752 ---WRDAAIPLGLQASGWAVLVGILIPRTFLI---------------VRGIERSDIAQALPSLTS 798
               |.|..:.:.|.|:.|..::..:||....:               .||:....|   |...|.
Mouse   304 SPTWDDPTLAIALAANAWTFVLFYVIPEVSQVTKPSPEQSYQGDMYPTRGVGYETI---LKEQTG 365

  Fly   799 LA-FAQNNQYSSEQ--SVYECVNPAMRHCSQDEVNHQSPSEIPTLPLRGGGPRRQQFFANLRQAN 860
            .: |.:|..:|.::  |....|:|...:..|...:...|:|   :.|...||....:...|.:|.
Mouse   366 QSMFVENKAFSMDEPASAKRPVSPYSGYNGQLLTSVYQPTE---MALMHKGPSEGAYDVILPRAT 427

  Fly   861 AN 862
            ||
Mouse   428 AN 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tm_3 <692..779 CDD:278433 22/96 (23%)
Gprc5cXP_030102156.2 7tmC_RAIG3_GPRC5C 80..337 CDD:320404 58/292 (20%)
TM helix 1 81..105 CDD:320404 4/23 (17%)
TM helix 2 119..140 CDD:320404 7/40 (18%)
TM helix 3 149..171 CDD:320404 6/21 (29%)
TM helix 4 190..206 CDD:320404 1/15 (7%)
TM helix 5 237..260 CDD:320404 4/28 (14%)
TM helix 6 274..296 CDD:320404 7/21 (33%)
TM helix 7 306..331 CDD:320404 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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