DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boss and grm2b

DIOPT Version :9

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_001274476.1 Gene:grm2b / 564461 ZFINID:ZDB-GENE-060201-5 Length:874 Species:Danio rerio


Alignment Length:971 Identity:181/971 - (18%)
Similarity:326/971 - (33%) Gaps:329/971 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LAPLISSTTE--GPSSGTTASLV--PEICLNGLQLTVNSADEGTVIRKQEEFVKILEGDVVLSVL 148
            |.|:..:|..  .|.:|:...::  .::.:.|| ..|:...:||     |:..||.|...:..: 
Zfish    12 LIPVAQTTPRYAPPLAGSKREIIIDGDLVIGGL-FPVHEKGKGT-----EDCGKINEERGIQRL- 69

  Fly   149 TKDPDSALFVINRVNQANLIMADFEIGIRAISIDNASLAENLLIQEVQFLQQCTT--YSMGIF-- 209
                ::.|..::.:||.|.|:...::|  |..:|..|.....|.|.:.|::...|  :..|..  
Zfish    70 ----EAMLLALDEINQDNRILPGLKLG--AHILDTCSKDTYALEQSLAFVRASLTKVHQPGFICP 128

  Fly   210 -----VDWELYKQLESVI----KDLEYNI------WPIP-----GTRAHLFPK------------ 242
                 |..||...:..||    .|:...:      :.||     .|.|.|..|            
Zfish   129 DGSNPVPDELPLAISGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPP 193

  Fly   243 -------VAHLLHQMPWGEKIASVEIATETLE-MYNE-----FMEAARQEHMCL----------- 283
                   :|.:|....|      ..::|...| .|.|     |.:.||...:|:           
Zfish   194 DFYQAKAIAEILRYFNW------TYVSTVASEGDYGETGIDAFQQEARVRQICIATSVKVSRSVN 252

  Fly   284 ----------MHFKSDDNVYIMFGNK------LASHFKENGTLFSVPTDR--------TDDEFLA 324
                      :..|::..|.|:|...      ||:..:.|.|...|.:|.        .|.|..|
Zfish   253 QGNYETVIRSLQQKANAKVVILFTRSEDARELLAAAARMNVTFIWVASDGWGAQESVVHDSEKAA 317

  Fly   325 DLPNRAFVLMENEIDLSTAVELDATPTALDEILIGKSVLPSRVLSFAGSIIDLMNWLRG------ 383
               |.||.:   |:...:..|.:...|.|...|..::                 .|.|.      
Zfish   318 ---NGAFTI---ELASYSIREFEDYFTKLTPELNTRN-----------------PWFREYWEHNF 359

  Fly   384 --SLSKH--CKRGEEHDLYVLESCFNFL---NFIEDWRTSEYRQA--HDTAEILSLLLMRKLGTA 439
              :|..|  ..:...:||:..||...|:   .:...:.....|||  .:|.::...:   |.|..
Zfish   360 GCNLQDHGCASKSLRNDLFKPESKIMFVVNAVYAMAYALHNMRQAVCPNTTKVCDAM---KPGNG 421

  Fly   440 MNFQMYQKKVLTLDKITGESRTE----LREIASQNFVTNVT--------TYYHYNRDNHTSLELK 492
            ..|  |::.:|         :|:    .|...::|.|...:        ..:||.::::..:..|
Zfish   422 KRF--YREFIL---------KTKFDAPFRPADTENVVRFTSLGDSLGRYNIFHYRKEDNKYVYRK 475

  Fly   493 TKF---GQVFN-------------------CQYSAGDNRR--------------YPFLFD----- 516
            ..:   |.|.|                   ||.:...:.:              :.||.:     
Zfish   476 VGYWAQGLVLNTSLVPWAGGVAPTSQCSDPCQPNEAKSMQPGDVCCWICIPCQPHQFLLNEFTCV 540

  Fly   517 ------------------GESVMFWRIKMDTWVATGLTAAILGLIATLAILVFIVVRISLGDVFE 563
                              .|..:.|   .|.|....:|.|.||::.|||:         .|....
Zfish   541 DCGFGQWPLANLTGCYELPEEYIHW---SDAWAVGPVTIACLGMLCTLAV---------AGLFLR 593

  Fly   564 GNPTTSILLL---LSLILVFCSFVPYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFV 625
            .|.|..:...   ||.||:|...:.|::.::...:.|..          :||:|...:...:...
Zfish   594 SNDTPVVKASGRELSYILLFGVLLCYAMTFIYIAKPSAF----------VCALRRLGLGTSFAVC 648

  Fly   626 FSLLLCRAVMLASIGSEGG---------FLSHVNGYIQAVICAFSVVAQVGMSVQLLVV------ 675
            :|.||.:...:|.|  .||         |:|..:   |..|||..:.||:.:::..|:|      
Zfish   649 YSALLTKTNRIARI--FGGARDSAQRPRFISPAS---QVAICAALISAQLLVALVWLLVEAPGVR 708

  Fly   676 MHVASE-----TVSCENIYYGRWLWGLLAYDFALLC-----CVGALIPSIY-----RSQRNYREG 725
            ..|..:     |:.|.::            |.::|.     |:..::.:.|     :...|:.|.
Zfish   709 KEVGPDRRDVVTLKCNSL------------DSSMLVSLSYNCILIILCTFYAFKTRKCPENFNEA 761

  Fly   726 ILIVIGSVLIMVIWVA-----WIALSLFGDEWRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIE 785
            ..|........:||:|     ::..|.:..:.....|.:.|  ||..||..:..|:..:|     
Zfish   762 KFIGFTMYTTCIIWLAFQPIFYVTASDYRVQTTTMCISVSL--SGSVVLGCLFAPKIHII----- 819

  Fly   786 RSDIAQALPSLTSLAFAQNNQYSS---------EQSVYECVNPAMRHCSQDEVNHQSPSEI 837
               :.|...::|||. |::|::||         .|:....:.|.:  |:..||...:.|.:
Zfish   820 ---LFQPQKNVTSLR-AKDNRFSSAVTAPSSTYSQASASTIVPTV--CNGREVVDSTTSSL 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tm_3 <692..779 CDD:278433 18/101 (18%)
grm2bNP_001274476.1 PBP1_mGluR_groupII 37..487 CDD:107370 94/505 (19%)
ANF_receptor 67..462 CDD:279440 80/444 (18%)
NCD3G 499..547 CDD:284890 4/47 (9%)
7tm_3 581..818 CDD:278433 54/274 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24060
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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