DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boss and mGluR

DIOPT Version :10

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster


Alignment Length:897 Identity:148/897 - (16%)
Similarity:285/897 - (31%) Gaps:288/897 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ISITTRAPTTVASTTDDEVSSSVDGQLAPLISSTTEGPSSGTTASLVPEICLNGLQLTVNSADEG 126
            |::..:.|    |..||:|..|:       ||...:.|::            .|:.|...:.|..
  Fly   248 IAVAEKVP----SAADDKVFDSI-------ISKLQKKPNA------------RGVVLFTRAEDAR 289

  Fly   127 TVIR--------------------KQEEFVKILEG--DVVLSVLTKDPDSALF---------VIN 160
            .:::                    ||:   |:|||  |:....:|.:..|.:.         :..
  Fly   290 RILQAAKRANLSQPFHWIASDGWGKQQ---KLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTP 351

  Fly   161 RVNQANLIMADF----------EIGIRAISIDNASLAENLLIQEVQFLQQC-TTYSMGIFVDWEL 214
            ..||.|...|::          .:.::..:.::|:..:|.:  .|:...:| .:|.:...|.:|.
  Fly   352 ETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKI--GVKAKTECDDSYRLSEKVGYEQ 414

  Fly   215 YKQLESVIKDLEYNIWPIPGTRAHLFPKVAHLLHQMPWGEKIASVEIATETLEMYNEFMEAARQE 279
            ..:.:.|: |..|              ..|:.||.:.........:..|||.:            
  Fly   415 ESKTQFVV-DAVY--------------AFAYALHNLHNDRCNTQSDQTTETRK------------ 452

  Fly   280 HMCLMHFKSDDNVYIMFGNKLASHFKENGTLFSVPTDRTDDEFLADLPNRAFVLMENEIDLSTAV 344
                 |.:|:...|                 ..:.|| |..:...|:.|                
  Fly   453 -----HLQSESVWY-----------------RKISTD-TKSQACPDMAN---------------- 478

  Fly   345 ELDATPTALDEILIGKSVLPSRVLSFAGSIIDLMNWLRGSLSKHCKRGEEHDLYVLESCFNFLNF 409
                        ..||....:.:|:.  |.||    |.||..|..::|:....|      :.||:
  Fly   479 ------------YDGKEFYNNYLLNV--SFID----LAGSEVKFDRQGDGLARY------DILNY 519

  Fly   410 IEDWRTSEYRQAHDTAEILSLLLMRKLGTAMNFQMYQKKVLTLDKITGESRT------ELREIAS 468
            .....:|.|:             .:.:|...|......:.:..:|.|.:..:      |:..|..
  Fly   520 QRQENSSGYQ-------------YKVIGKWFNGLQLNSETVVWNKETEQPTSACSLPCEVGMIKK 571

  Fly   469 QN-----FVTNVTTYYHYNRDNHTSLELKT---KFGQVFNC-----QYSAGDNRRYPFLFDGESV 520
            |.     ::.:....:.|..|..|..:...   .:....:|     ||                 
  Fly   572 QQGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQY----------------- 619

  Fly   521 MFWRIKMDTWVATGLTAAILGLIATLAILVFIVVRISLGDVFEGNPTTSILLLLSLILVFC-SFV 584
            |.|.   ..:....:..||.|:..|..::|..........|.......|..||..:::.:| :|.
  Fly   620 MKWN---SLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFA 681

  Fly   585 PYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLA----SIGSEGGF 645
            ..:...:|.                 |.::.|.:.:.:..::|.||.:...::    |.......
  Fly   682 LIAKPTIGS-----------------CVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQR 729

  Fly   646 LSHVNGYIQAVICAFSVVAQVGMSVQLLVVMHVASETVSCENIYYGR-------------WLWGL 697
            |.:::...|.||....:..||     |:.::.:..|.......|..|             :|:..
  Fly   730 LKYISPQSQVVITTSLIAIQV-----LITMIWMVVEPPGTRFYYPDRREVILKCKIQDMSFLFSQ 789

  Fly   698 LAYDFAL--LCCVGAL----IPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFGD----EW 752
            | |:..|  :|.:.|:    ||      .|:.|...|........:||:|::.: .||.    |.
  Fly   790 L-YNMILITICTIYAIKTRKIP------ENFNESKFIGFTMYTTCIIWLAFVPI-YFGTGNSYEV 846

  Fly   753 RDAAIPLGLQASGWAVLVGILIPRTFLIV----RGIERSDIAQALPSLTSLAFAQNNQYSSEQSV 813
            :...:.:.:..|....||.:..|:.:::|    :.:.:..:...:...::.|.||....||..|.
  Fly   847 QTTTLCISISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSR 911

  Fly   814 YECVNPAMRHCSQDEV-NHQSPSEIPTLPLRGGGPRRQQFFANLRQANANIN 864
            ...  |.....:...| .:.|.|.:||           |...:|.:|:|..|
  Fly   912 THA--PGTSALTGGAVGTNASSSTLPT-----------QNSPHLDEASAQTN 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tmC_Boss 529..782 CDD:320170 50/284 (18%)
TM helix 1 529..554 CDD:320170 5/24 (21%)
TM helix 2 566..587 CDD:320170 5/21 (24%)
TM helix 3 612..636 CDD:320170 4/23 (17%)
TM helix 4 656..672 CDD:320170 4/15 (27%)
TM helix 5 690..716 CDD:320170 9/44 (20%)
TM helix 6 724..747 CDD:320170 5/22 (23%)
TM helix 7 751..776 CDD:320170 4/24 (17%)
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 68/424 (16%)
NCD3G 556..605 CDD:462210 6/48 (13%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 49/280 (18%)
TM helix 1 625..650 CDD:320600 5/24 (21%)
TM helix 2 662..683 CDD:320600 5/20 (25%)
TM helix 3 692..716 CDD:320600 4/23 (17%)
TM helix 4 738..758 CDD:320600 6/24 (25%)
TM helix 5 781..807 CDD:320600 6/26 (23%)
TM helix 6 815..838 CDD:320600 5/23 (22%)
TM helix 7 845..870 CDD:320600 4/24 (17%)

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