DRSC/TRiP Functional Genomics Resources

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Protein Alignment boss and Gprc5a

DIOPT Version :9

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_852109.2 Gene:Gprc5a / 232431 MGIID:1891250 Length:356 Species:Mus musculus


Alignment Length:353 Identity:86/353 - (24%)
Similarity:136/353 - (38%) Gaps:81/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 WRIKMDTWVATGLTAAILGLIATLAILVFIVVRISLGDVFEGNPTTSILLLLSLILVFCSFVPYS 587
            |.|.::|..|.|..|.    :|.:..|||::.::...:..:..| ...|.||.::.||.....:.
Mouse    29 WGIALETLAAVGAVAT----VACMFALVFLICKVQDSNKRKMLP-AQFLFLLGVLGVFGLTFAFI 88

  Fly   588 IEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEGGFLSHVNG- 651
            |:.            |..|..|    |.|:..:::...||.||..|..|..:         |.| 
Mouse    89 IKL------------DGATGPT----RFFLFGVLFAICFSCLLAHAFNLIKL---------VRGR 128

  Fly   652 ------YIQAVICAFSVVAQVGMSVQLLVV------MHVASETVSCEN-------IYYGRWLWGL 697
                  .|.::...||:|..| ::::.||:      ::|.||..:...       :.|...|..|
Mouse   129 KPLSWLVILSLAVGFSLVQDV-IAIEYLVLTMNRTNVNVFSELPAPRRNEDFVMLLIYVLVLMVL 192

  Fly   698 LAYDFALLCCVGALIPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFGD---EWRDAAIPL 759
            ..:...|:.| |:.  |.::     |.|..|...|.|.:.||||||.|.|..|   :|.|..:..
Mouse   193 TFFASFLVFC-GSF--SGWK-----RHGFHICFTSFLSIAIWVAWIVLLLIPDIDRKWDDTILST 249

  Fly   760 GLQASGWAVLVGILIPRTFLIVRGIERSDI----AQALPSLTSLAF-AQNNQYSSEQ-------- 811
            .|.|:||..|...::|....:.|....:|.    |...|.|...:: .:|..||.|:        
Mouse   250 ALVANGWVFLAFYILPEFRQLPRQRSPTDYPVEDAFCKPQLMKQSYGVENRAYSQEEITQGLEMG 314

  Fly   812 -SVYECVNPAMRHCSQDEVNHQSPSEIP 838
             ::|.   |...|....  |||....||
Mouse   315 DTLYA---PYSTHFQLQ--NHQKDFSIP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tm_3 <692..779 CDD:278433 28/89 (31%)
Gprc5aNP_852109.2 7tmC_RAIG1_4_GPRC5A_D 28..272 CDD:320406 69/281 (25%)
TM helix 1 28..53 CDD:320406 8/27 (30%)
TM helix 2 67..88 CDD:320406 6/21 (29%)
TM helix 3 97..121 CDD:320406 8/27 (30%)
TM helix 4 138..154 CDD:320406 4/16 (25%)
TM helix 5 175..201 CDD:320406 4/25 (16%)
TM helix 6 211..234 CDD:320406 11/22 (50%)
TM helix 7 241..266 CDD:320406 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..356 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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