DRSC/TRiP Functional Genomics Resources

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Protein Alignment boss and gprc5b

DIOPT Version :10

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:XP_004918020.1 Gene:gprc5b / 100491763 XenbaseID:XB-GENE-981355 Length:390 Species:Xenopus tropicalis


Alignment Length:400 Identity:86/400 - (21%)
Similarity:156/400 - (39%) Gaps:102/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 RYPFLFDGESVMFWRIKMDTWVATGLTAAILGLIATLAILVFIVVRISLGDVFEGNPTTSI--LL 572
            ||.:|.|.:::  |.|.::       ..|..|::.||.:::.::||:......|......|  |.
 Frog    36 RYVYLCDLDAI--WGIVVE-------AVAGAGVLTTLLLMLILLVRLPFITEKEKKSPLGIHFLF 91

  Fly   573 LLSLILVFCSFVPYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLA 637
            ||..:.:|.....:.|:            ||    ..:|..|.|:..:::...||.||.:...:.
 Frog    92 LLGTLGLFGLAFAFIIQ------------ED----EAICCTRRFLWGVLFALCFSCLLAQGWRIR 140

  Fly   638 SIGSEGGFLS--HVNGYIQAVICAFSVVAQVGMSVQLLVVMHVASETVSCEN---------IYYG 691
            .:...|...|  |:.|   .|||.  ::.||.::|:.:::..|....::|..         ||..
 Frog   141 RLVRHGKSPSGWHMVG---MVICL--MLVQVIIAVEWIILTVVRDRKLACSYEPMDFVMVLIYVM 200

  Fly   692 RWLWGLLAYDFALLCCVGALIPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFG------- 749
            ..:...|...|..||         .:.|:..:.||.::|.::..::|||||:.:.|:|       
 Frog   201 VLMVATLGLSFFTLC---------GKFQKWKKNGICLIITTLFSVLIWVAWMTMYLYGNNELKRS 256

  Fly   750 DEWRDAAIPLGLQASGWAVLV--GILIPRTFLIVRGIERS----DIAQ------------ALPSL 796
            |:|.|..:.:.|.:|||..|:  .|:.....::....|.:    |.:|            .||. 
 Frog   257 DKWNDPTLAIALISSGWVFLIFHAIIEVHCTILPAPQENTTNYFDTSQPRMRETPFEEDIQLPR- 320

  Fly   797 TSLAFAQNNQYSSEQSVYECVNPAMRHCSQDEVNHQSPSEIPTLPLR-------------GGGPR 848
               ::.:|..:|.::.     |.|||   .....:.|....|:.|.|             .||..
 Frog   321 ---SYMENKAFSMDEH-----NAAMR---AGGFRNGSLGSRPSAPFRSNVYQPTEMAVVLNGGTD 374

  Fly   849 RQQFFANLRQ 858
            ..||..|.::
 Frog   375 ILQFILNQKE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tmC_Boss 529..782 CDD:320170 60/274 (22%)
TM helix 1 529..554 CDD:320170 4/24 (17%)
TM helix 2 566..587 CDD:320170 5/22 (23%)
TM helix 3 612..636 CDD:320170 6/23 (26%)
TM helix 4 656..672 CDD:320170 6/15 (40%)
TM helix 5 690..716 CDD:320170 4/25 (16%)
TM helix 6 724..747 CDD:320170 8/22 (36%)
TM helix 7 751..776 CDD:320170 8/26 (31%)
gprc5bXP_004918020.1 7tmC_RAIG2_GPRC5B 46..289 CDD:320405 62/281 (22%)
TM helix 1 46..71 CDD:320405 6/33 (18%)
TM helix 2 85..106 CDD:320405 5/20 (25%)
TM helix 3 115..139 CDD:320405 6/23 (26%)
TM helix 4 156..172 CDD:320405 7/20 (35%)
TM helix 5 188..211 CDD:320405 3/22 (14%)
TM helix 6 224..247 CDD:320405 8/22 (36%)
TM helix 7 258..283 CDD:320405 8/24 (33%)

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