DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boss and gprc5bb

DIOPT Version :9

Sequence 1:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster
Sequence 2:XP_005160220.1 Gene:gprc5bb / 100002676 ZFINID:ZDB-GENE-090313-75 Length:407 Species:Danio rerio


Alignment Length:417 Identity:99/417 - (23%)
Similarity:147/417 - (35%) Gaps:117/417 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 YPFLFDGESVMFWRIKMDTWVATGLTAAILGLIATLAILVFIV---VRISLGDVFEGNPTTSILL 572
            |..|.|.|||  |.|.::.....|..:|::..|..||.|..:.   .|..:|         .:||
Zfish    42 YRVLCDLESV--WGIVLEAIACGGTVSALILAIILLAKLKTVTEPDKRCGVG---------PLLL 95

  Fly   573 LL-------SLILVFCSFVPYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLL 630
            ||       ||.|||         .||..             ..||.||..:...::...||.||
Zfish    96 LLAGTMGLFSLSLVF---------MVGRG-------------EVLCMVRRGLWGALFAMCFSCLL 138

  Fly   631 CRAVMLASIGSEGGFLSHVNGYIQAVICAFSVVAQVGMSVQLLVVM----HVASETVSCENIYYG 691
            .:.|.|..:.  ||..|.....:..:..|.:||..:.....||:.:    |.|.|.:..:.:.  
Zfish   139 VQGVRLKKLA--GGRRSPAGSSLAGLAFALTVVQGIIAGEWLLLTVVREGHAACEYLPLDFVL-- 199

  Fly   692 RWLWGLLAYDFALLCCVGALIPSIYRSQRNYRE------------GILIVIGSVLIMVIWVAWIA 744
                 :.:|..|||.....|..::.....|.||            .:.:.:..:..:::||||:.
Zfish   200 -----VCSYALALLLAASVLSLAVVLCGGNNREESSRKRMKWRCNAVWLFLSCLSSLLLWVAWLG 259

  Fly   745 LSLFGD--------EWRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIERSDIAQALPSLTSLAF 801
            |.|:||        :|.:.|:.:.|...||.:|:...||.|.|.:|           ||....|.
Zfish   260 LYLYGDVGISIVAKDWDEPALAVALVTEGWVLLLFHAIPETHLCLR-----------PSSQRSAD 313

  Fly   802 AQNNQYSSEQSVYECVNPAMRHCSQDE--VNHQSP---------SEIPTLPLRGGG--------- 846
            ...|.|.:.|.      ||.:....||  .|.::|         .|.....|:.||         
Zfish   314 TAQNYYDTPQP------PAAQGYHDDERPTNPRAPFTESQAYTVEEHSAAVLQAGGYHNGLIRPA 372

  Fly   847 -PRRQQFFANLRQA---NANINPQRPP 869
             |.|...:.....|   ||...|..||
Zfish   373 LPFRSHVYQPTEMALLMNAGPIPTAPP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bossNP_542440.1 7tm_3 <692..779 CDD:278433 25/106 (24%)
gprc5bbXP_005160220.1 7tm_3 93..>140 CDD:278433 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
21.870

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