DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42235 and LOC799259

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_001339635.2 Gene:LOC799259 / 799259 -ID:- Length:606 Species:Danio rerio


Alignment Length:500 Identity:103/500 - (20%)
Similarity:202/500 - (40%) Gaps:96/500 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEERRGSEALDYLVGGRQMKV 167
            |::..::|..::   .::|.:..:      |.|.||...|     .:|  ||.:  :||||.:.:
Zfish    26 GLLAIVIFYLLI---LMVGIWAAW------KNKHAGISEG-----TDR--SETI--MVGGRDIGL 72

  Fly   168 FPVALSLVASFVSGISLLGTSTEIYVYGTQYAFILVTL--AISGAISWYIFLPVFCNLQLTSTYE 230
            |....::.|::|.|..:.||:..:||.|...|:.....  |:|..:....|.....:....:..:
Zfish    73 FVGGFTMTATWVGGGYINGTAESVYVPGCGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLD 137

  Fly   231 YFERRFDRRVRIFGSCLFV---VMNILWQPICIYVPALTLNQVSGISVSKIVPVTSFICILYTSV 292
            .|::.:.:|:   |..||:   :..|.|....:.....||:.:..:.::..|.:::.|.:.||.|
Zfish   138 PFQQLYGQRM---GGLLFIPALLGEIFWSAAILSALGATLSVIVDMDINMSVMISALIAVFYTLV 199

  Fly   293 GGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSV--VLDHNRQYDRLVGPDMTFDPTARMGV 355
            ||:..|.:|||:|        |..|..|.    .:||  .|.:....|..|        ||...|
Zfish   200 GGLYSVAYTDVVQ--------LFCIFLGL----WISVPFALSNPAVSDIAV--------TAVKAV 244

  Fly   356 F---------------------ALFVGGALFKLQANGINQAIVQRYLTLPNNKDVKKALVLSLIG 399
            |                     .|.:||..:        |...||.|:..:....:....|:..|
Zfish   245 FQDPWLGEIHPSDGWMWADNFCLLMLGGIPW--------QVYFQRVLSASSATYAQVLSFLAAFG 301

  Fly   400 FMFVMLMCVYIGLLAFAEFYH---CDPITTGLARAKDQVIPLYVVKNVGHIPGLVGLFVAGVFSA 461
            .:.:.:..|.||.:..:..::   ..|:........|.::|: |::::  .|..|..|..|..||
Zfish   302 CLVMAVPSVLIGAIGASTDWNQTSYGPVAPVDKDESDMILPI-VLQHL--CPSFVSFFGLGAVSA 363

  Fly   462 A-LSSLSTALNSLSGVILTDFVEPFRKKPLTERQTAYLLRGVVISFGLISMASVPIVQRLGLVMQ 525
            | :||..:::.|.|.:...:..:...::..::|:..:::|..:..||.::.|...:...:..:..
Zfish   364 AVMSSADSSILSASSMFARNIYQLAFRQSASDREIVWVMRITIFVFGAVATAMALLTGSVYGLWY 428

  Fly   526 LSSTVAAITCGPLLGAFSVGMLLPFVKTESLLTGISCASSFTAYI 570
            |||.:..:...|.|      :.:.|:|      |.:...|...|:
Zfish   429 LSSDLVYVIIFPQL------LSVLFIK------GTNTYGSVAGYV 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 102/497 (21%)
LOC799259XP_001339635.2 SLC5sbd_CHT 27..525 CDD:271368 102/498 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.