DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42235 and slc5a3b

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_005167848.1 Gene:slc5a3b / 568338 ZFINID:ZDB-GENE-070912-43 Length:709 Species:Danio rerio


Alignment Length:483 Identity:117/483 - (24%)
Similarity:203/483 - (42%) Gaps:112/483 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 YLVGGRQMKVFPVALSLVASFVSGISLLGTSTEIYVYGTQYAFILVTLAISGAIS------W--- 213
            |.:.||.|....:..||   |||.|            |:::   .:.||.|||.|      |   
Zfish    42 YFLAGRTMNWAVIGASL---FVSNI------------GSEH---FIGLAGSGAASGFAVAAWEFN 88

  Fly   214 ---------YIFLPVFCNLQLTSTYEYFERRF-DRRVRIFGSCLFVVMNILWQ-PICIYVPALTL 267
                     ::|:||:.:..:.:..||..:|: .:|::|:.:.|.:::.|..: .:.:|..||.:
Zfish    89 ALLLLQLLGWVFIPVYIHSGVYTMPEYLSKRYGGKRLKIYFAGLSLLLYIFTKLSVDLYAGALFI 153

  Fly   268 NQVSG----ISVSKIVPVTSFICILYTSVGGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLS 328
            .:..|    :|:..::.:|:    |.|..||:..|::||.:|..:|||..|.:.|...:.:|||.
Zfish   154 QESLGWNLYLSIILLISMTA----LLTVTGGLVAVIYTDTLQAVLMIGGALTLTIISLIKVGGLE 214

  Fly   329 VVLDHNRQYDRLVGPDMT---------FDPTARMGVF------ALFVG---------GALFKLQA 369
            .|   ..:|...| |::|         |:.|....::      .|..|         |.|.....
Zfish   215 GV---REKYMEAV-PNVTAILASSNFSFEYTNSCRIYPKPDSLKLLRGPLDEDIPWPGFLLGQTP 275

  Fly   370 NGI-----NQAIVQRYLTLPNNKDVKKALVLSLIGFMFVMLMCVYIGLLAFAEF---------YH 420
            :.|     :|.||||.|...|....|.:.:::.:..:..|.:.|..|:::...|         .|
Zfish   276 SSIWYWCADQVIVQRVLAAKNIAHAKGSTLMAGVLKILPMFIIVIPGMISRILFPDELACIGPEH 340

  Fly   421 CDPITTGLARAKDQVIPLYVVKNVGHIP-GLVGLFVAGVFSAALSSLSTALNSLSGVILTDFVEP 484
            |..:....|...:...|..|   :..:| ||.||.:|.:.:|.:|.|.:..||.|.:...|..:.
Zfish   341 CMAVCGSQAGCSNIAYPRLV---MSVMPVGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDIYKM 402

  Fly   485 FRKKPLTERQTAYLLRGVVISFGLISMASVPIV-----QRLGLVMQ-----LSSTVAAI------ 533
            .|.: .:.|:...:.|..||....||:|.||::     .::.|.:|     |:..:||:      
Zfish   403 LRAR-ASSRELVVIGRIFVIFMVAISIAWVPVIIEMQGGQMYLYIQEVAGYLTPPIAALFLLGVF 466

  Fly   534 --TCGPLLGAFSVGMLLPFVKTESLLTG 559
              .|.. :|||..||....:.|..||.|
Zfish   467 WKRCNE-IGAFCGGMTGFVLGTTRLLLG 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 117/483 (24%)
slc5a3bXP_005167848.1 SLC5-6-like_sbd 12..709 CDD:294310 117/483 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580119
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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