DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42235 and Slc5a3

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_059087.2 Gene:Slc5a3 / 53881 MGIID:1858226 Length:718 Species:Mus musculus


Alignment Length:613 Identity:143/613 - (23%)
Similarity:233/613 - (38%) Gaps:176/613 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 AVIGFYF------GFIEK-KQKKQKLAGKDGGGAAGVEERRGSEALDYLVGGRQMKVFPVALSLV 175
            ||:..||      ||... |..:..::|                   |.:.||.|....:..|| 
Mouse    11 AVVALYFILVMCIGFFAMWKSNRSTVSG-------------------YFLAGRSMTWVAIGASL- 55

  Fly   176 ASFVSGISLLGTSTEIYVYGTQYAFILVTLAISGAIS------W------------YIFLPVFCN 222
              |||.|            |:::   .:.||.|||.|      |            ::|:|::..
Mouse    56 --FVSNI------------GSEH---FIGLAGSGAASGFAVGAWEFNALLLLQLLGWVFIPIYIR 103

  Fly   223 LQLTSTYEYFERRF-DRRVRIFGSCLFVVMNILWQ-PICIYVPALTLNQVSG----ISVSKIVPV 281
            ..:.:..||..:|| ..|::::.:.|.:::.|..: .:.:|..||.:.:..|    :||..::.:
Mouse   104 SGVYTMPEYLSKRFGGHRIQVYFAALSLLLYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGM 168

  Fly   282 TSFICILYTSVGGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSVVLDHNRQYDRLVGPD-- 344
            |:    |.|..||:..|::||.:|..:||...|.:::...:.:||...|   .|:| .|..||  
Mouse   169 TA----LLTVTGGLVAVIYTDTLQALLMIIGALTLMVISMVKIGGFEEV---KRRY-MLASPDVA 225

  Fly   345 ------------------------MTFDPTARMGVFALFVGGALFKLQAN----GINQAIVQRYL 381
                                    |..|||.....:..|:.|   :..|:    ..:|.||||.|
Mouse   226 SILLKYNLSNTNACMVHPKANALKMLRDPTDEDVPWPGFILG---QTPASVWYWCADQVIVQRVL 287

  Fly   382 TLPNNKDVKKALVLSLIGF-----MFVMLMCVYIGLLAFAEFY------HCDPITTGLARAKDQV 435
            ...|....|.:.:::  ||     ||::::...|..:.||:..      ||..:....|...:..
Mouse   288 AAKNIAHAKGSTLMA--GFLKLLPMFIIVVPGMISRIVFADEIACINPEHCMQVCGSRAGCSNIA 350

  Fly   436 IPLYVVKNVGHIP-GLVGLFVAGVFSAALSSLSTALNSLSGVILTDFVEPFRKKPLTERQTAYLL 499
            .|..|:..|   | ||.||.:|.:.:|.:|.|.:..||.|.:...|..:..||. .:.|:...:.
Mouse   351 YPRLVMTLV---PVGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDVYKLIRKS-ASSRELMIVG 411

  Fly   500 RGVVISFGLISMASVPIV-----QRLGLVMQ-----LSSTVAAI-------------------TC 535
            |..|....:||:|.|||:     .::.|.:|     |:..|||:                   ..
Mouse   412 RIFVAFMVVISIAWVPIIVEMQGGQMYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFYGGMA 476

  Fly   536 GPLLGAFSVGMLLPFV----------KTESLLTGISCASSFTAYIVVRAQIAIFTGSLTFPAKPV 590
            |.:|||  |.::|.|.          .....:..|......||...:...|.:....||.|  |.
Mouse   477 GFVLGA--VRLILAFTYRAPECDQPDNRPGFIKDIHYMYVATALFWITGLITVIVSLLTPP--PT 537

  Fly   591 SIQDCDYTFDLPANWNATTTATPTESTS 618
            ..|....||     |:..|..| .||.|
Mouse   538 KDQIRTTTF-----WSKKTLVT-KESCS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 143/613 (23%)
Slc5a3NP_059087.2 SLC5sbd_SMIT 9..718 CDD:271382 143/613 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836586
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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