DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42235 and Slc5a8

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001178916.1 Gene:Slc5a8 / 500820 RGDID:1564146 Length:611 Species:Rattus norvegicus


Alignment Length:619 Identity:191/619 - (30%)
Similarity:334/619 - (53%) Gaps:65/619 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEERRGSEALDY 158
            |.|:.:..|.:.||:||..||.:.|.||.|:.|.             |||.        ..:.|:
  Rat     2 DASRDIGSFVVWDYVVFAGMLLISAAIGIYYAFA-------------GGGQ--------QTSKDF 45

  Fly   159 LVGGRQMKVFPVALSLVASFVSGISLLGTSTEIYVYGTQYAFILVTLAISGAISWYIFLPVFCNL 223
            |:|||.|...||||||.|||:|.:::|||..|:|.:|..::...||......||..:|||||..|
  Rat    46 LMGGRSMSAVPVALSLTASFMSAVTVLGTPAEVYRFGAIFSIFGVTYFFVVVISAEVFLPVFYRL 110

  Fly   224 QLTSTYEYFERRFDRRVRIFGSCLFVVMNILWQPICIYVPALTLNQVSGISVSKIVPVTSFICIL 288
            .:||||||.|.||:|.:|:.|:.||:|..||:..|.||.|||.||||:|..:...|..|..:|..
  Rat   111 GITSTYEYLELRFNRFIRLCGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAVVATGVVCTF 175

  Fly   289 YTSVGGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSVVLDHNRQYDRLVGPDMTFDPTARM 353
            |.::||:|.||||||.|..:|:.....|||:.::..||::.:|.......||...:...:|..|.
  Rat   176 YCTLGGLKAVVWTDVFQVGIMVAGFASVIIQASITQGGINTILSDASNGGRLNFWNFNPNPLQRH 240

  Fly   354 GVFALFVGGALFKLQANGINQAIVQRYLTLPNNKDVKKALVLSLIGFMFVMLMCVYIGLLAFAEF 418
            ..:.:.|||........|:||:.||||::..:....|.:|.::|:|...:::..|:.||..::.:
  Rat   241 TFWTIIVGGTFTWTTIYGVNQSQVQRYISCKSRLHAKLSLYVNLVGLWVILICSVFCGLALYSRY 305

  Fly   419 YHCDPITTGLARAKDQVIPLYVVKNVGHIPGLVGLFVAGVFSAALSSLSTALNSLSGVILTDFVE 483
            :.|||.|:......||::|..|:..:.:.||:.|||||..:|..||::|:::|:|:.|.:.|.::
  Rat   306 HDCDPWTSKKVSEVDQLMPYLVLDILKNYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIK 370

  Fly   484 PFRKKPLTERQTAYLLRGVVISFGLISMASVPIVQRLGLVMQLSSTVAAITCGPLLGAFSVGMLL 548
            | |.|.|:|:..:::.:|:.:.:|.:.:....:...:|.::|.:.::..:..|||||.||:|:|:
  Rat   371 P-RFKSLSEKSLSWISQGMSVLYGALCIGMAAVASLMGALLQAALSIFGMVGGPLLGLFSLGILV 434

  Fly   549 PFVKTESLLTGISCASSFTAYIVVRAQIAIFTGSLTFP-----AKPVSIQ--DCDYTFDLPANWN 606
            ||..:.....|:....:.:.::.:.||:        :|     ..|:|::  .|:.|.: ..:| 
  Rat   435 PFANSVGAFAGLLAGFAVSLWVGIGAQL--------YPPLPERTLPLSLETHGCNSTHN-GTDW- 489

  Fly   607 ATTTATPTESTSHGIHEI------------SFLWYTAVGSVGTVLGSLLATLYFGRQDPRVVDKE 659
            .:||..|..:::..||::            |:|:::.:|::.|:|..:|.:|..|.:      |:
  Rat   490 MSTTEMPFSTSAFQIHDVERSALMDNWYSLSYLYFSTIGTLTTLLVGILISLATGGR------KQ 548

  Fly   660 LISPVLRKFWYGKYESVASEEKNNFNLHESETQL 693
            .:.|   :|...|.:.:     :||::.:.:|.:
  Rat   549 NLDP---RFLLTKQDFL-----SNFDVFKKKTHV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 179/559 (32%)
Slc5a8NP_001178916.1 SLC5sbd_SMCT1 7..549 CDD:271402 183/579 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340268
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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