DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42235 and Slc5a10

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus


Alignment Length:567 Identity:135/567 - (23%)
Similarity:235/567 - (41%) Gaps:120/567 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 YLVGGRQMKVFPVALSLVAS------FVSGISLLGTSTEIYVYGTQYAFILVTLAISGAISWYIF 216
            |.:.||.|..:|:..||.||      |: |::..|.:..:.|.|.::....|.||::     ::|
  Rat    50 YFLAGRDMAWWPIGASLFASSEGSGLFI-GLAGSGAAGGLAVAGFEWNATYVLLALA-----WVF 108

  Fly   217 LPVFCNLQLTSTYEYFERRF-DRRVRIFGSCLFVVMNILWQ-PICIYVPALTLNQVSGISVSKIV 279
            :|::.:.::.:..||.::|| .:|:|::.|.|.:::::..: .|.:|..||.::...|.:.....
  Rat   109 VPIYVSSEIVTLPEYIQKRFGGQRIRMYLSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLST 173

  Fly   280 PVTSFICILYTSVGGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSVVLDHNRQYDRL---- 340
            .:|..|..|||..||:..|::||.:|..:|:...:|:.:|....:||          |::|    
  Rat   174 ILTLAITALYTIAGGLATVIYTDALQTAIMVVGAVILAVKAFNQIGG----------YEQLEAAY 228

  Fly   341 --VGPDMTFDPTA----RMGVFALFVGGALFKLQANGI--------------NQAIVQRYLTLPN 385
              ..|..|...|.    |.....:|...:...|...|:              :|.||||.|:..|
  Rat   229 AQATPSRTIPNTTCHLPRADAMHMFRDPSTGDLPWTGMTFGLTIMATWYWCTDQVIVQRSLSARN 293

  Fly   386 NKDVKKALVLSLIGFMFVMLMCVYIGLLAFAEFYHCDPITTGLARAKDQVIPLYVVK-------- 442
            ....|...:|:....|..|.:.:..|:::...|    |...|.      |:|...::        
  Rat   294 LNHAKAGSILASYLKMLPMGLMIMPGMISRVLF----PDDVGC------VVPSECLRACGAEIGC 348

  Fly   443 -NVGH-------IP-GLVGLFVAGVFSAALSSLSTALNSLSGVILTDFVEPFRKKPLTERQTAYL 498
             |:.:       :| ||.||.:|.:.:|.||||::..||.|.:...|....|| ....||:...:
  Rat   349 SNIAYPKLVMELMPIGLRGLMIAVMMAALLSSLTSIFNSSSTLFTMDIWRQFR-PGAGERELLLV 412

  Fly   499 LRGVVISFGLISMASVPIVQ-----RLGLVMQ--LSSTVAAITCGPLLGAF-------------S 543
            .|.|::....:|:|.:|::|     :|.:.||  .||....:|...|||.|             .
  Rat   413 GRLVIVVLVGVSVAWIPVLQGSNSGQLFIYMQSVTSSLAPPVTAIFLLGIFWRRANEQGAFWGLM 477

  Fly   544 VGMLLPFVK--TESLLTGISCASSFT------AYIVVRAQIAIF--------TGSLTFPAKPVSI 592
            .|:|:..::  .|.|.....|....|      :...:...||:|        .|||..| .|...
  Rat   478 AGLLVGALRLVLEFLYPEPHCGQIDTRPFPLGSIHYLHFAIALFFLTCAVMAAGSLLSP-PPQQR 541

  Fly   593 QDCDYT-FDLPANWNATTTATPTESTSHGIHEISFLWYTAVGSVGTV 638
            |..:.| :.|..||:..|      .|..|.......::|.|.:|..:
  Rat   542 QIENLTWWTLDPNWSLRT------KTGDGQTPQKRAFWTRVCNVNAI 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 135/567 (24%)
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:294310 135/567 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340283
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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