DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42235 and F52H2.4

DIOPT Version :9

Sequence 1:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001360058.1 Gene:F52H2.4 / 186132 WormBaseID:WBGene00018716 Length:491 Species:Caenorhabditis elegans


Alignment Length:513 Identity:148/513 - (28%)
Similarity:251/513 - (48%) Gaps:64/513 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 ISGAISWYIFLPVFCNLQLTSTYEYFERRFDRRVRIFGSCLFVVMNILWQPICIYVPALTLNQVS 271
            ||..|..::||||...|:||:.|||||||||.:.|...:.||.|..||:..:.:|.|:|.:..::
 Worm    11 ISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASIT 75

  Fly   272 GISVSKIVPVTSFICILYTSVGGIKGVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSV-----VL 331
            .|.::..:.:|:.:...|.||||:|..:.|..||..::..:|..:|   ::.|..:|:     .:
 Worm    76 NIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTMTFII---SISLREMSIHDVYTSV 137

  Fly   332 DHNRQYDRLVGPDMTFDPTARMGVFALFVGG-----ALFKLQANGINQAIVQRYLTLPNNKDVKK 391
            .|.:   |.:..|...:||.|..|::|.:||     |||     ..||..:|||:.:...|..:|
 Worm   138 VHGK---RFILNDFRINPTIRHSVWSLLIGGTGNILALF-----AANQLSIQRYMAMDTLKSAQK 194

  Fly   392 ALVLSLIGFMFVMLMCVYIGLLAFAEFYHCDPITTGLARAKDQVIPLYVVKNVGHIPGLVGLFVA 456
            .::|:::....:::..|.:|.|.:|.:..|.| ..|.|   ::::|.:|:......||.||||.|
 Worm   195 VVLLNIVCNTIILVSYVSVGFLIYAHYKDCHP-QIGNA---NELLPRFVMDVTSKYPGSVGLFAA 255

  Fly   457 GVFSAALSSLSTALNSLSGVILTDFVEPFRKK----PLTERQTAYLLRGVVISFGLISMASVPIV 517
            .|:||.:|:||.:..::|.:::.|..:.:|::    ||...|....:|.:.|....||:....:.
 Worm   256 AVYSAGISTLSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQNAMRILPIVLSFISIFVAFLC 320

  Fly   518 QRL-GLVMQLSSTVAAITCGPLLGAFSVGMLLPFVKTESLLTGISCASSFTAYIVVRAQIAIFTG 581
            ..| .:::|:|..|.....||:||:|.||:.:|.||.::.|.|:      ...|:|...|:|  |
 Worm   321 SMLQSIILQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAALVGL------IGSIIVCFSISI--G 377

  Fly   582 SLTFPAKPVSIQ--DCDYT----FDLPANWNATTTATPTESTSHGIHEISFLWYTAVGSVGTVLG 640
            |:....|||:::  .|...    ||  .::....|:||.......|..||:.:|:.:..|..|..
 Worm   378 SVLVKVKPVALELGQCSNQTLTYFD--ESFIGAVTSTPLVFGLERIFAISYQYYSIIAVVTNVAL 440

  Fly   641 SLLATLYF------GRQDPRVVDKELISPVLRKFWYGKYESVASEEKNNFNLHESETQ 692
            |::....|      ....|  |..||:||:|          ..|..|.:..|....||
 Worm   441 SIVMQKLFELCSLTANHLP--VSHELVSPLL----------TYSSSKRDPELEAHRTQ 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 135/459 (29%)
F52H2.4NP_001360058.1 SLC5-6-like_sbd 1..447 CDD:382020 135/460 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29060
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 1 1.000 - - otm14518
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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